RetrogeneDB ID: | retro_ogar_1515 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873550.1:6070940..6071270(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SYNJ2BP | ||
Ensembl ID: | ENSOGAG00000013211 | ||
Aliases: | None | ||
Description: | synaptojanin 2 binding protein [Source:HGNC Symbol;Acc:18955] |
Percent Identity: | 75.68 % |
Parental protein coverage: | 88.8 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | YVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLRNLLHHDAVNLFRNAGYAVSLRVQHRLQVQN |
Y.........S.IKENGAAALD..LQEGD.IL.VNGQDL.NLLH.DA..LFRNAGYAVSLRVQHRLQVQN | |
Retrocopy | YLVTEEEMSFSCIKENGAAALDEQLQEGD-IL*VNGQDLKNLLH*DAIDLFRNAGYAVSLRVQHRLQVQN |
Parental | GPTGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQKL |
.P.GH.GEGDP.GIPIFMVL.PV.AL..VAAWAF.RYRQKL | |
Retrocopy | EPIGHQGEGDPRGIPIFMVLEPVYALSTVAAWAFKRYRQKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000007586 | 1 retrocopy | |
Dipodomys ordii | ENSDORG00000010450 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000011086 | 1 retrocopy | |
Mus musculus | ENSMUSG00000090935 | 3 retrocopies | |
Otolemur garnettii | ENSOGAG00000013211 | 1 retrocopy |
retro_ogar_1515 ,
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