Parental gene: | Synj2bp, ENSMUSG00000090935 |
| Aliases: | None |
| Description: | synaptojanin 2 binding protein [Source:MGI Symbol;Acc:MGI:1344347] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 12:81497940..81532911(-) |
>ENSMUSG00000090935
ATGAACGGACGGGTGGATTATTTAGTCACGGAGGAAGAGATCAACCTGACGAGAGGACCTTCGGGGCTGGGCTTCAACAT
CGTCGGTGGGACAGATCAACAGTATGTCTCCAACGACAGTGGCATCTACGTCAGCCGTATCAAAGAGGATGGGGCTGCGG
CCCAGGATGGGCGGCTCCAGGAGGGTGATAAGATCCTCTCGGTAAATGGCCAAGATCTGAAGAACCTGCTGCACCAAGAT
GCTGTAGACCTCTTCCGTAATGCGGGATGTGCTGTGTCCCTGAGAGTACAGCACAGGTTACCAGTGCAGAATGGACCTAT
AGTACATCGAGGTGAAGGAGAGCCAAGTGGAGTTCCTGTAGCTATGGTGCTGCTACCAGTGTTTGCCCTCACCATGGTAG
CAGTTTGGGCCTTCGTGAGATACCGAAAGCAGCTTTGA
ATGAACGGACGGGTGGATTATTTAGTCACGGAGGAAGAGATCAACCTGACGAGAGGACCTTCGGGGCTGGGCTTCAACAT
CGTCGGTGGGACAGATCAACAGTATGTCTCCAACGACAGTGGCATCTACGTCAGCCGTATCAAAGAGGATGGGGCTGCGG
CCCAGGATGGGCGGCTCCAGGAGGGTGATAAGATCCTCTCGGTAAATGGCCAAGATCTGAAGAACCTGCTGCACCAAGAT
GCTGTAGACCTCTTCCGTAATGCGGGATGTGCTGTGTCCCTGAGAGTACAGCACAGGTTACCAGTGCAGAATGGACCTAT
AGTACATCGAGGTGAAGGAGAGCCAAGTGGAGTTCCTGTAGCTATGGTGCTGCTACCAGTGTTTGCCCTCACCATGGTAG
CAGTTTGGGCCTTCGTGAGATACCGAAAGCAGCTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 30 .56 RPM |
| SRP007412_cerebellum | 31 .48 RPM |
| SRP007412_heart | 34 .93 RPM |
| SRP007412_kidney | 42 .91 RPM |
| SRP007412_liver | 43 .61 RPM |
| SRP007412_testis | 29 .09 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000007586 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000023967 | possible_ortholog | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000010450 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000014492 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000011086 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000008559 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000013211 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1428 | 88.97 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1538 | 90.34 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_1802 | 90.00 | 89.66 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000090935 retrocopies