RetrogeneDB ID: | retro_ogar_2339 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873613.1:2545387..2545960(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000028372 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MEAF6 | ||
Ensembl ID: | ENSOGAG00000006773 | ||
Aliases: | None | ||
Description: | MYST/Esa1-associated factor 6 [Source:HGNC Symbol;Acc:25674] |
Percent Identity: | 98.95 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAMHNKAAPPQIPDTRRELAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKN |
MAMHNKAAPPQIPDTRRELAELVKRKQELAETLA.LERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKN | |
Retrocopy | MAMHNKAAPPQIPDTRRELAELVKRKQELAETLADLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKN |
Parental | SNSKNDRRNRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIEKREPGSGTESDTSPDFHNQENEPSQEDP |
SNSKND.RNRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIEKREPGSGTESDTSPDFHNQENEPSQEDP | |
Retrocopy | SNSKNDPRNRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIEKREPGSGTESDTSPDFHNQENEPSQEDP |
Parental | EDLDGSVQGVKPQKAASSTSSGSHHSSHKKRKNKNRHRIDLKLNKKPRADY |
EDLDGSVQGVKPQKAASSTSSGSHHSSHKKRKNKNRHRIDLKLNKKPRADY | |
Retrocopy | EDLDGSVQGVKPQKAASSTSSGSHHSSHKKRKNKNRHRIDLKLNKKPRADY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000001927 | 1 retrocopy | |
Cavia porcellus | ENSCPOG00000025988 | 1 retrocopy | |
Erinaceus europaeus | ENSEEUG00000013971 | 3 retrocopies | |
Macropus eugenii | ENSMEUG00000003403 | 3 retrocopies | |
Myotis lucifugus | ENSMLUG00000017128 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000006773 | 1 retrocopy |
retro_ogar_2339 ,
|
Vicugna pacos | ENSVPAG00000001916 | 1 retrocopy |