RetrogeneDB ID: | retro_ogar_431 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873521.1:4555862..4556761(-) | ||
Located in intron of: | ENSOGAG00000015357 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | B4UST9_OTOGA | ||
Ensembl ID: | ENSOGAG00000010568 | ||
Aliases: | None | ||
Description: | GTP-binding protein 10 (Predicted) [Source:UniProtKB/TrEMBL;Acc:B4UST9] |
Percent Identity: | 88.7 % |
Parental protein coverage: | 84.27 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MVHSGCVLFRKYGNFIDNLRLFTKGGSGGMGYPRLGGEGGRGGDVWVVAHKKMTLRQLKNKYPQKRFVAE |
MVHSGC.LFRKYGNFIDNLR.FTKGGSGGMGYPRLGGEGGRGGDVWVVAHKKMTLRQL..KYP.K.FVAE | |
Retrocopy | MVHSGCMLFRKYGNFIDNLRHFTKGGSGGMGYPRLGGEGGRGGDVWVVAHKKMTLRQLRDKYPYKQFVAE |
Parental | GGANSKVSALKGSKGKDYEIPVPLGISVTDENGKIIGELNKEGDRILVAEGGLGGKLLTNFLPLKGQKR- |
GGA.S..SALKGSKGKD.E..VPLGIS.T.ENGKIIGELNKEGDRI.VAEGGLGGKLLTNFLPLKGQ... | |
Retrocopy | GGADSQISALKGSKGKDCEVLVPLGISITNENGKIIGELNKEGDRIVVAEGGLGGKLLTNFLPLKGQNE< |
Parental | IIHLDLKLIADVGLVGFPNAGKSSLLSRVSHAKPAIADYAFTTLKPELGKIMYNDFKQISVADLPGLIEG |
IIHLDLKL.A.VGLVGFPNAG.SSLLSRV.HAKPAI.DYAFTTLKPELGKI.YNDFKQISVADLPGL.EG | |
Retrocopy | IIHLDLKLVAEVGLVGFPNAGRSSLLSRVAHAKPAIVDYAFTTLKPELGKI*YNDFKQISVADLPGLVEG |
Parental | AHMNKGMGHRFLKHIERTRQLLFVVDICGFQLSSKTQYRTAFETILLLTKELELYKEELQTKPALLVVNK |
AHMN..M.HRFLKHI.RTRQLLFVVDIC.FQL.SKTQY.TAFETILLLTK.LELYKEELQTKPALLVVNK | |
Retrocopy | AHMNERMSHRFLKHIKRTRQLLFVVDICEFQLPSKTQYPTAFETILLLTKQLELYKEELQTKPALLVVNK |
Parental | MDLPDAQDKFHALMNQLQNPK |
MDLPDAQDKFHALMNQLQN.K | |
Retrocopy | MDLPDAQDKFHALMNQLQNSK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000014212 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000007418 | 1 retrocopy | |
Mus musculus | ENSMUSG00000040464 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000014847 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000010568 | 1 retrocopy |
retro_ogar_431 ,
|
Sus scrofa | ENSSSCG00000015305 | 1 retrocopy |