RetrogeneDB ID: | retro_sara_35 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_185429:13255..13741(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSSARG00000000965 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSARG00000007568 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 98.76 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MNQFGPSALINLSNFSSIKPEPASTPPQGSMANSTTVVKIPGTPGTGGRLSPENNQVLTKKKLQDLVREV |
MNQFGPSALINLSNFSSIKPEPASTPPQGSMANSTTVVKIPGTPGTGGRLSPENNQVLTKKKLQDLVREV | |
Retrocopy | MNQFGPSALINLSNFSSIKPEPASTPPQGSMANSTTVVKIPGTPGTGGRLSPENNQVLTKKKLQDLVREV |
Parental | DPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWIPGFGSEEIRPYK |
.PNEQLDE.VEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWIPGFGSEEIRPYK | |
Retrocopy | GPNEQLDEYVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWIPGFGSEEIRPYK |
Parental | KACTTEAHKQRMALIRKTTKK |
KACTTEAHKQRMALIRKTTKK | |
Retrocopy | KACTTEAHKQRMALIRKTTKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000004366 | 4 retrocopies | |
Callithrix jacchus | ENSCJAG00000009742 | 1 retrocopy | |
Cavia porcellus | ENSCPOG00000009044 | 3 retrocopies | |
Dipodomys ordii | ENSDORG00000015036 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000012597 | 2 retrocopies | |
Macropus eugenii | ENSMEUG00000000914 | 3 retrocopies | |
Myotis lucifugus | ENSMLUG00000012595 | 8 retrocopies | |
Monodelphis domestica | ENSMODG00000010943 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000015506 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000003935 | 2 retrocopies | |
Ochotona princeps | ENSOPRG00000001524 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000048288 | 1 retrocopy | |
Sorex araneus | ENSSARG00000007568 | 5 retrocopies | |
Tarsius syrichta | ENSTSYG00000005320 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000005548 | 1 retrocopy | |
Vicugna pacos | ENSVPAG00000006779 | 1 retrocopy |