RetrogeneDB ID: | retro_sara_447 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_210864:6816..7316(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSSARG00000007846 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NAA50 | ||
Ensembl ID: | ENSSARG00000004134 | ||
Aliases: | None | ||
Description: | N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:HGNC Symbol;Acc:29533] |
Percent Identity: | 91.76 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MKGSRIELGDVTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGELAKLAYFNDIAVGAVCCRVDHSQNQK |
MKG.RIEL.DVTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGELAKL.YFND.AVGAVCCRVDHSQNQK | |
Retrocopy | MKGNRIELEDVTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGELAKLVYFNDTAVGAVCCRVDHSQNQK |
Parental | RLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEVIET-KKNYY |
RLYIMT.GCLAPY.RL.IGTKMLNHVLNICEKDGTFD.IYLHVQISNESAIDFYRKFGF.VIET.K..Y. | |
Retrocopy | RLYIMTPGCLAPYPRLEIGTKMLNHVLNICEKDGTFD-IYLHVQISNESAIDFYRKFGFKVIET<KNYY- |
Parental | KRIEPADAHVLQKNLKVPSGQNADVQKTDN |
KRIEP.DAHVLQKNLKVPSGQNADVQKTDN | |
Retrocopy | KRIEPTDAHVLQKNLKVPSGQNADVQKTDN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dasypus novemcinctus | ENSDNOG00000001027 | 1 retrocopy | |
Homo sapiens | ENSG00000121579 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000004624 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000011197 | 1 retrocopy | |
Procavia capensis | ENSPCAG00000009780 | 2 retrocopies | |
Sorex araneus | ENSSARG00000004134 | 1 retrocopy |
retro_sara_447 ,
|
Ictidomys tridecemlineatus | ENSSTOG00000009438 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000009849 | 3 retrocopies |