RetrogeneDB ID: | retro_shar_337 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL841386.1:766354..766821(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ESD | ||
Ensembl ID: | ENSSHAG00000009581 | ||
Aliases: | None | ||
Description: | esterase D [Source:HGNC Symbol;Acc:3465] |
Percent Identity: | 70.25 % |
Parental protein coverage: | 55.28 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | VNATEEPWKTNYRMY-SYITDELPKLINANFPADPEKISIFGHSMGGHGALICTLKNPGKYKSVSAFSPI |
VNATE.PWKT..R.....I.DELP.L.NANFPADPEKISIFGHS.GG.GALIC.LKNP.KY.SVSAFSPI | |
Retrocopy | VNATEKPWKTKHRDV<THIIDELPELTNANFPADPEKISIFGHSSGG*GALICALKNPRKYQSVSAFSPI |
Parental | CNPILCPWGKKAFSGYLGSDKSKWEAYDATHLVKSYPDSKLDILIDQGKDDQFLKDGQLLPDNFIAACAE |
C.P.L..W..K.FSGY.GSD..KWEAYDA.HLVKS.P.S.LDILID.GK...F..D.QLLPDNF....AE | |
Retrocopy | CYPVLYLWEEKDFSGYIGSDQNKWEAYDAAHLVKSNPNSHLDILIDEGK-ELFIEDRQLLPDNFVVTYAE |
Parental | RKIPVVFRLQEGYDHNYY |
.KIPVVFRL.E..DH..Y | |
Retrocopy | WKIPVVFRL*E*FDHIRY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |