RetrogeneDB ID: | retro_tbel_2384 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_109789:50763..51105(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | COX7A2L | ||
Ensembl ID: | ENSTBEG00000014124 | ||
Aliases: | None | ||
Description: | cytochrome c oxidase subunit VIIa polypeptide 2 like [Source:HGNC Symbol;Acc:2289] |
Percent Identity: | 88.6 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MYYKFSGFTQKLAGAWASDAYSPQGLKPVASAEAPPIIFATPTKLTSNSTVYDYNGKNKVPELQKIFQKS |
MYYKFSGFTQKL.GAWASDAYSPQGLKPVASA..PPIIFATPTKLTSNSTV.DY.GKNKVPELQKIFQKS | |
Retrocopy | MYYKFSGFTQKLSGAWASDAYSPQGLKPVASADPPPIIFATPTKLTSNSTVSDYTGKNKVPELQKIFQKS |
Parental | DGVPIHLKRGLPDQMLYRTTMALTVGGTIYCLIALYMASQPRNK |
.GVPIHLKRGLPDQMLY.TTMALT.GG.IYCLI.LY..S.PRNK | |
Retrocopy | NGVPIHLKRGLPDQMLYQTTMALTTGGIIYCLITLYITSKPRNK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000032040 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000016278 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000008875 | 1 retrocopy | |
Mus musculus | ENSMUSG00000024248 | 2 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000027189 | 3 retrocopies | |
Otolemur garnettii | ENSOGAG00000016029 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000012014 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000012922 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000007294 | 7 retrocopies | |
Tupaia belangeri | ENSTBEG00000014124 | 3 retrocopies |
retro_tbel_2384 , retro_tbel_4472, retro_tbel_4545,
|