Parental gene: | ENSOCUG00000027189 |
| Aliases: | None |
| Description: | None |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 2:143765457..143773282(+) |
>ENSOCUG00000027189
ATGTTGCGTCTTGGGCCGGACGCCCGGGAGGCCGGGTCCTTCTTTAGGGCGGTCGCGCAGGCAGCGGCTGCAGGAAGCCG
GGCTCCGGGCGTCATGTACTACAAGTTTAGTGGCTTCACGCAAAAGTTGACGGGAGCATGGGCTTCGGACGCCTATTTCC
CGCAGGGATTAAAGCCTGTGGTTTCCACAGAAGCACCACCTATCATATTTGCTACCCCAACTAAATTGACCTCCAATTCT
CCCGCATATGATTATGCTGGGAAAAACAAAGTTCCAGAGTTGCAGAAGTTTTTCCAGAAATCTGATGGTGTGCCCATCCA
CCTGAAACGAGGCCTGCCTGACCAAATGCTTTACCGGACCACCATGGCGCTGACTGTGGGAGGGACCATCTACTGCCTGA
TCGCCCTCTACATGGCTTCACAACCCAAAAACAAATGA
ATGTTGCGTCTTGGGCCGGACGCCCGGGAGGCCGGGTCCTTCTTTAGGGCGGTCGCGCAGGCAGCGGCTGCAGGAAGCCG
GGCTCCGGGCGTCATGTACTACAAGTTTAGTGGCTTCACGCAAAAGTTGACGGGAGCATGGGCTTCGGACGCCTATTTCC
CGCAGGGATTAAAGCCTGTGGTTTCCACAGAAGCACCACCTATCATATTTGCTACCCCAACTAAATTGACCTCCAATTCT
CCCGCATATGATTATGCTGGGAAAAACAAAGTTCCAGAGTTGCAGAAGTTTTTCCAGAAATCTGATGGTGTGCCCATCCA
CCTGAAACGAGGCCTGCCTGACCAAATGCTTTACCGGACCACCATGGCGCTGACTGTGGGAGGGACCATCTACTGCCTGA
TCGCCCTCTACATGGCTTCACAACCCAAAAACAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 6 .71 RPM |
| SRP017611_kidney | 25 .34 RPM |
| SRP017611_brain | 32 .78 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000032040 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000014705 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000011940 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000115944 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010739 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000016278 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000008875 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000024248 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000016666 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000016029 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000011865 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000012014 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000012922 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000014124 | ortholog_one2many | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_28 | 94.74 | 78.62 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1617 | 93.28 | 91.72 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ocun_1781 | 72.45 | 66.90 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000027189 retrocopies