RetrogeneDB ID: | retro_tsyr_1941 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_70320:7032..7765(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAZ | ||
Ensembl ID: | ENSTSYG00000006150 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:HGNC Symbol;Acc:12855] |
Percent Identity: | 94.74 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELS-NEERNLLSVAYKNVVGARRSSWRVVSSIEQKT |
MDKNELVQKAKLAEQAERY.DMAACMKSVTEQGAELS..EERNLLSVAYKNVVGA.RSSWRV.SSIEQKT | |
Retrocopy | MDKNELVQKAKLAEQAERYNDMAACMKSVTEQGAELS<HEERNLLSVAYKNVVGAHRSSWRVISSIEQKT |
Parental | EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAA-GDDK |
EG.EKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFY.K.KGDYYRYLA.VA..GDDK | |
Retrocopy | EGVEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYSKIKGDYYRYLAKVAV<GDDK |
Parental | KGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSE |
KG.VDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAEL.TLSE | |
Retrocopy | KGVVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELATLSE |
Parental | ESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAGEGGEN |
ESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAGEGGEN | |
Retrocopy | ESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAGEGGEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |