RetrogeneDB ID: | retro_tsyr_1075 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_297058:1289..1780(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAZ | ||
Ensembl ID: | ENSTSYG00000006150 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:HGNC Symbol;Acc:12855] |
Percent Identity: | 91.52 % |
Parental protein coverage: | 66.94 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE |
MDKNELVQK..LAEQAERYD.MAACMKSVTEQGAELSNEERN.L.VAYK.VVGARRSSWRVVSSIEQKTE | |
Retrocopy | MDKNELVQKDTLAEQAERYDGMAACMKSVTEQGAELSNEERNQLLVAYKKVVGARRSSWRVVSSIEQKTE |
Parental | GAEKKQQMAREYREKIETELRDICN-DVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKK |
GAEKKQQMAREYREKIETELR.ICN..VLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLA.VAAGDDKK | |
Retrocopy | GAEKKQQMAREYREKIETELRNICN<YVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAKVAAGDDKK |
Parental | GIVDQSQQAYQEAFEISKKEMQPTH |
GIVDQSQQAY.EAFEISKKE..P.H | |
Retrocopy | GIVDQSQQAYREAFEISKKERIPPH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |