RetrogeneDB ID: | retro_tsyr_623 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_15283:27469..27742(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DNAJC24 | ||
Ensembl ID: | ENSTSYG00000009243 | ||
Aliases: | None | ||
Description: | DnaJ (Hsp40) homolog, subfamily C, member 24 [Source:HGNC Symbol;Acc:26979] |
Percent Identity: | 58.7 % |
Parental protein coverage: | 61.74 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | RSAQRFLEVGRAWKVLGNAEARREYDLRRREDDLRNTGPVDAQVYLEEMSWNEDDHSFHLRCRCSGNYSV |
...Q.F.....AWK.LGN.E...EYDL...EDDL.N.GPVD.Q.YLEEM.WNEDDHSF.L.C.C...YS. | |
Retrocopy | KNVQKFMKIDQAWKILGNEETKKEYDLQWHEDDLSNIGPVDGQIYLEEMLWNEDDHSFSLSC*CDRKYSG |
Parental | SKAEAEEVHLIPCDSCSLIIEL |
.K.EA..V.LI.CD..SL.IEL | |
Retrocopy | FKDEA-GVNLISCDTSSLNIEL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dasypus novemcinctus | ENSDNOG00000013512 | 1 retrocopy | |
Dipodomys ordii | ENSDORG00000000248 | 3 retrocopies | |
Echinops telfairi | ENSETEG00000003054 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000007553 | 3 retrocopies | |
Macaca mulatta | ENSMMUG00000006845 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000017878 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000007848 | 1 retrocopy | |
Ochotona princeps | ENSOPRG00000001638 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000003390 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000003471 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000009243 | 1 retrocopy |
retro_tsyr_623 ,
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