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Detailed information on CNT0039396


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0033555, E-value = 1e-08 (P. patens)
CNT0021321, E-value = 2e-07 (Z. mays)
CNT0023169, E-value = 4e-06 (A. trichopoda)
CNT0029379, E-value = 6e-08 (O. sativa)
CNT0011364, E-value = 9e-07 (S. tuberosum)
CNT0036707, E-value = 2e-11 (C. reinhardtii)

Expression of CNT0039396

ERR364347: 2.655 RPKM

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MWQQQRQQQQQQQQPSKNRDQRQGKERRDLFG*

Sequence

>CNT0039396
GAGCCCTGACGAAGGAAAAGCCAAGAAACGCAGCAGCATTTTAGCGCTGCGTGTACAGAGGAGTGGTATATTGTGAATGGTTTTGTGAAGAGATTGTAGC
TACTGAATCGGGCCAGCCAGATCAACAGCAGTCGTGGAGGCTGCTGCTCGATCATCACGAAATGTGGCAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCAG
CAGCCTTCAAAAAATCGCGATCAGAGACAAGGAAAAGAGCGACGAGATCTCTTTGGATGAATATGGTATGGCTTGCACTTGCAGGGACCAGAGCAGCAGG
GACATTGAAAGACTGTTGCTGGTGGAGACGAA