Detailed information on CNT0042615


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana):
NONATHT002060, E-value = 9e-126

Potentially orthologous lncRNAs
:
CNT0003560 in V. vinifera

CNT0033040 in P. patens

CNT0020781 in Z. mays

CNT0000589 in G. max

CNT0021918 in A. trichopoda

CNT0026995 in O. sativa

CNT0008755 in S. tuberosum

CNT0040165 in S. moellendorffii

Most similar lncRNAs
:
CNT0003560, E-value = 4e-14 (V. vinifera)
CNT0033040, E-value = 1e-32 (P. patens)
CNT0020781, E-value = 2e-25 (Z. mays)
CNT0000589, E-value = 3e-30 (G. max)
CNT0021918, E-value = 5e-38 (A. trichopoda)
CNT0026995, E-value = 8e-31 (O. sativa)
CNT0008755, E-value = 2e-10 (S. tuberosum)
CNT0040165, E-value = 1e-20 (S. moellendorffii)

Expression of CNT0042615

Peptides detected in this lncRNA

>peptide 1 (73 aa)
DATKVAYIKRDREREGEGGRERERERERERERERERERERERERERERERERERERERERERERERERERERTW

Sequence

>CNT0042615
CAGACGCAACTAAAGTTGCGTACATAAAGAGAGATAGAGAGAGAGAGGGAGAGGGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAACGTGG