Parental gene:

ATP5B, ENSACAG00000016752

Aliases:None
Description:ATP synthase subunit beta [Source:UniProtKB/TrEMBL;Acc:G1KT22]
Organism:Anole lizard (Anolis carolinensis)
Coordinates:2:92924736..92933786(+)


>ENSACAG00000016752
ATGTTGAGCTTCGCTGGTCGCCGCTGTGTCGCCTCGGCCGCCTCCCTCCTACGCGGGAGCGGGACGAGGCCGCTCCAGGA
CCTGCTCCAGCTTCGCAGCGGGGCCGTCGCCTCCGCCACCGAGGCCCGCCGAAACTATGCTGCACAAACAGCACCTGCAG
CTAAAGCTGGAGTGGCTACAGGGCGCATTGTTGCTGTCATTGGTGCTGTGGTGGATGTCCAGTTTGAGGAGGCCCTGCCA
CCCATCCTCAATGCTCTGGAAGTACAAGGCAGAGACACACGGCTGGTCCTGGAGGTAGCACAGCACTTAGGTGAGAATAC
TGTTCGTACCATTGCTATGGATGGTACCGAAGGCTTGGTGAGAGGCCAAAGGGTTTTGGATTTAGGTGCCCCTATTAGAA
TCCCTGTAGGACCCGAGACCCTGGGCAGAATCATGAACGTGATTGGAGAGCCAATTGATGAGAGAGGCCCCATAACAACA
AAACAGTTTGCTGCTATTCATGCAGAAGCTCCAGCCTTTGTTGAGATGAGTGTCGAACAGGAAATCCTTGTCACCGGCAT
TAAAGTTGTGGATCTCCTTGCACCTTATGCCAAAGGTGGTAAAATTGGCCTGTTTGGTGGTGCTGGTGTAGGCAAGACAG
TATTGATCATGGAGCTGATTAACAATGTTGCCAAAGCACATGGTGGCTACTCTGTGTTTGCTGGTGTTGGGGAGAGAACC
CGTGAAGGAAACGACTTGTACCATGAAATGATTGAATCTGGAGTCATCAACCTGAAGGACGCTACATCCAAGGTCGCTCT
TGTTTATGGACAGATGAATGAGCCACCAGGTGCTCGTGCTAGGGTTGCTCTAACTGGGTTGACTGTGGCTGAATATTTCA
GAGACCAGGAGGGCCAGGATGTATTACTTTTCATTGATAATATCTTCCGATTCACACAGGCTGGATCCGAGGTGTCAGCT
TTGCTGGGCAGAATTCCCTCAGCTGTGGGATACCAGCCTACTCTGGCAACTGATATGGGTACCATGCAGGAAAGGATCAC
AACAACTCAGAAGGGCTCTATCACCTCAGTGCAGGCCATCTATGTACCAGCTGATGACTTGACTGATCCAGCTCCTGCGA
CCACATTTGCCCACTTGGACGCCACCACTGTGCTGTCGCGTGCCATTGCTGAACTGGGCATTTATCCAGCTGTAGATCCT
CTAGACTCCACCTCCCGTATCATGGATCCCAATATTGTGGGGCAGGAACATTATGATGTGGCCCGTGGAGTGCAAAAGAT
CTTGCAGGATTATAAGTCTCTCCAAGACATCATTGCTATTTTGGGTATGGATGAGTTATCCGAAGAGGATAAATTGACTG
TGGCCCGTGCGCGTAAGATACAGAAATTTTTGTCCCAGCCCTTCCAAGTAGCTGAGGTCTTCACTGGCTATGCAGGGAAG
CTGGTACCACTGAAGGAAACCATTAAAGGATTCCAGCAGATCCTGACAGGAGAGTATGACCATCTCCCTGAACAGGCTTT
CTACATGGTTGGACCCATTGAGGAGGCAGTGGCAAAGGCTGATAAGCTGGCTGAAGAGCACTCATGA

Library Parental gene expression (RPM)
SRP009831_adrenal 227 .69 RPM
SRP009831_brain 361 .06 RPM
SRP009831_dewlap 241 .22 RPM
SRP009831_embryo 673 .03 RPM
SRP009831_heart 1817 .54 RPM
SRP009831_liver 275 .27 RPM
SRP009831_lung 139 .03 RPM
SRP009831_ovary 245 .32 RPM
SRP009831_skeletal_muscle 522 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013315 ortholog_one2one 1 retrogene
retro_btau_1264,
Choloepus hoffmanni ENSCHOG00000005350 ortholog_one2one 1 retrogene
retro_chof_1544,
Callithrix jacchus ENSCJAG00000033571 ortholog_one2one 2 retrogenes
retro_cjac_1488, retro_cjac_928,
Dasypus novemcinctus ENSDNOG00000011289 ortholog_one2one 1 retrogene
retro_dnov_361,
Echinops telfairi ENSETEG00000010208 ortholog_one2many 1 retrogene
retro_etel_2162,
Homo sapiens ENSG00000110955 ortholog_one2one 1 retrogene
retro_hsap_2128,
Gorilla gorilla ENSGGOG00000011596 ortholog_one2one 1 retrogene
retro_ggor_1648,
Macropus eugenii ENSMEUG00000002875 ortholog_one2one 6 retrogenes
retro_meug_1416, retro_meug_1608, retro_meug_411, retro_meug_430, retro_meug_685, retro_meug_908,
Microcebus murinus ENSMICG00000001084 ortholog_one2one 1 retrogene
retro_mmur_495,
Macaca mulatta ENSMMUG00000001027 ortholog_one2many 1 retrogene
retro_mmul_103,
Pongo abelii ENSPPYG00000004668 ortholog_one2one 2 retrogenes
retro_pabe_1921, retro_pabe_2032,
Pan troglodytes ENSPTRG00000005107 ortholog_one2one 1 retrogene
retro_ptro_1557,
Sus scrofa ENSSSCG00000000405 ortholog_one2one 1 retrogene
retro_sscr_453,
Tarsius syrichta ENSTSYG00000009962 ortholog_one2one 1 retrogene
retro_tsyr_644,
Tursiops truncatus ENSTTRG00000002144 ortholog_one2one 1 retrogene
retro_ttru_371,
Vicugna pacos ENSVPAG00000004025 ortholog_one2one 2 retrogenes
retro_vpac_405, retro_vpac_562,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_181 92.17 52.46
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Download FASTA sequences of all ENSACAG00000016752 retrocopies