Parental gene:

ENSMMUG00000001027

Aliases:None
Description:ATP synthase subunit beta [Source:UniProtKB/TrEMBL;Acc:F6SIE0]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:11:53724856..53734352(-)


>ENSMMUG00000001027
ATGTTGGGTCTTGTGGGTCGTGTGGCCACTGCTTCGGCCTCCGGGGCCTTGCGGGCACTCACTCCTTCAGCGTCGCTACC
CCCAGCTCAGCTCTTACTGCGGGCCGCTCCGACGGCGGTCCATCCTGTCAGGGACTATGCGGCGCAAACATCTCCTTCGC
CAAAAGCGGGCGCCGCCACCGGGCGCATCGTGGCGGTCATTGGCGCAGTGGTGGACGTCCAGTTTGATGAGGGACTACCA
CCAATTCTAAATGCCCTGGAAGTGCAAGGCAGGGAGACCAGACTGGTTTTGGAGGTGGCCCAGCATTTGGGTGAGAGCAC
AGTAAGGACTATTGCTATGGATGGTACGGAAGGCTTGGTTAGAGGCCAGAAAGTACTGGATTCTGGTGCACCAATCAAAA
TTCCTGTTGGTCCTGAGACTTTGGGCAGAATCATGAATGTTATTGGAGAACCTATTGATGAAAGAGGTCCCATCAAAACC
AAACAATTTGCTGCCATTCATGCTGAGGCTCCAGAGTTCATGGAAATGAGTGTTGAGCAGGAAATTCTGGTGACTGGTAT
CAAGGTTGTGGATCTGCTAGCTCCCTATGCCAAGGGTGGCAAAATTGGGCTTTTTGGTGGTGCCGGAGTTGGCAAGACTG
TACTGATCATGGAGTTAATCAACAATGTCGCCAAAGCCCATGGTGGTTACTCTGTGTTTGCTGGTGTTGGTGAGAGGACC
CGTGAAGGCAATGATTTATACCATGAAATGATTGAATCTGGTGTTATCAACTTAAAAGATGCCACCTCTAAGGTAGCGCT
GGTATATGGTCAAATGAATGAACCACCTGGTGCTCGTGCCCGGGTAGCTCTTACTGGACTGACTGTGGCTGAATACTTCA
GAGACCAAGAAGGTCAAGATGTACTGCTATTTATTGATAATATCTTTCGCTTCACCCAGGCTGGTTCAGAGGTGTCTGCA
TTATTGGGCAGAATCCCTTCTGCCGTGGGCTATCAGCCTACCCTCGCCACTGACATGGGTACTATGCAGGAAAGAATTAC
CACTACCAAGAAGGGATCTATCACCTCTGTACAGGCTATCTATGTGCCTGCTGATGACTTGACTGACCCTGCTCCTGCTA
CTACGTTTGCCCATTTGGATGCTACCACTGTACTGTCACGTGCCATTGCTGAGCTGGGCATCTATCCAGCTGTGGATCCT
CTAGACTCCACCTCTCGCATCATGGATCCCAACATTGTTGGCAGTGAGCATTACGATGTTGCCCGTGGGGTGCAAAAAAT
CCTGCAGGACTGGATCTTTCTTAGTGATTTGTGTGATTTGTTTTGGAGCAAGGGAATGCAGTATTTTTCTAACAGCACCA
AACTAGGACTATGGAGAACAAGAAAGACACTAATCTTTCTTGGATGGCCTCAAGTGGTAAGGAATGTTACACGATGCAGA
AAATTGATATCCCTCCACTTCTTACTTTTTTTTTTTCCCCGTCATACAGGTGAATATGACCATCTCCCAGAACAGGCCTT
CTATATGGTGGGACCCATTGAAGAAGCTGTGGCAAAAGCTGATAAGCTGGCTGAAGAGCATGCGTCGTGA

Library Parental gene expression (RPM)
SRP007412_brain 93 .90 RPM
SRP007412_brain_prefrontal_cortex 367 .54 RPM
SRP007412_cerebellum 112 .68 RPM
SRP007412_heart 259 .86 RPM
SRP007412_kidney 138 .14 RPM
SRP007412_liver 131 .14 RPM
SRP007412_testis 43 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000016752 ortholog_one2many 1 retrogene
retro_acar_181,
Bos taurus ENSBTAG00000013315 ortholog_one2many 1 retrogene
retro_btau_1264,
Choloepus hoffmanni ENSCHOG00000005350 ortholog_one2many 1 retrogene
retro_chof_1544,
Callithrix jacchus ENSCJAG00000033571 ortholog_one2many 2 retrogenes
retro_cjac_1488, retro_cjac_928,
Dasypus novemcinctus ENSDNOG00000011289 ortholog_one2many 1 retrogene
retro_dnov_361,
Echinops telfairi ENSETEG00000010208 ortholog_many2many 1 retrogene
retro_etel_2162,
Homo sapiens ENSG00000110955 ortholog_one2many 1 retrogene
retro_hsap_2128,
Gorilla gorilla ENSGGOG00000011596 ortholog_one2many 1 retrogene
retro_ggor_1648,
Latimeria chalumnae ENSLACG00000009340 possible_ortholog 1 retrogene
retro_lcha_27,
Macropus eugenii ENSMEUG00000002875 ortholog_one2many 6 retrogenes
retro_meug_1416, retro_meug_1608, retro_meug_411, retro_meug_430, retro_meug_685, retro_meug_908,
Microcebus murinus ENSMICG00000001084 ortholog_one2many 1 retrogene
retro_mmur_495,
Pongo abelii ENSPPYG00000004668 ortholog_one2many 2 retrogenes
retro_pabe_1921, retro_pabe_2032,
Pan troglodytes ENSPTRG00000005107 ortholog_one2many 1 retrogene
retro_ptro_1557,
Sus scrofa ENSSSCG00000000405 ortholog_one2many 1 retrogene
retro_sscr_453,
Tarsius syrichta ENSTSYG00000009962 possible_ortholog 1 retrogene
retro_tsyr_644,
Tursiops truncatus ENSTTRG00000002144 ortholog_one2many 1 retrogene
retro_ttru_371,
Vicugna pacos ENSVPAG00000004025 ortholog_one2many 2 retrogenes
retro_vpac_405, retro_vpac_562,
Xenopus tropicalis ENSXETG00000024665 possible_ortholog 1 retrogene
retro_xtro_68,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_103 92.65 89.98
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Download FASTA sequences of all ENSMMUG00000001027 retrocopies