Parental gene:

PGAM5, ENSAMEG00000013437

Aliases:None
Description:phosphoglycerate mutase family member 5 [Source:HGNC Symbol;Acc:28763]
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL193005.1:377722..381903(-)


>ENSAMEG00000013437
AGGCGAGAACCACTGTCCCTGGTCAACCTGCGGAAGAGGAACCTGGACTCTGGAGAAGAAGAACTGGCGTCCAGGCTGGA
CCACTGCAAAGCCAAGGCCACGCGACACATCTTCCTCATCAGGCACTCCCAGTACCATGTGGATGCCTCCCTGGAAAAGG
ACCGCACTCTGACACCCCTGGGTCGTGAACAGGCTGAACTAACTGGGCTCCGACTTGCAAGCTTGGGGTTGAAGTTTAAT
AAAATTGTCCATTCGTCCATGACCCGTGCGATAGAAACCACTGATATCATCAGCAAACACCTGCCAGGTGTTTGCAAGGT
CAGCACAGACCTGCTGAGAGAAGGTGCCCCCATCGAGCCCGACCCACCCGTGTCCCACTGGAAACCGGAGGCTGTGCAGT
ATTACGAAGATGGAGCCCGGATCGAGGCCGCCTTCCGGAACTACATCCACCGGGCAGATGCCAAGCAGCAGGAGGACAGT
TACGAGATCTTCATCTGCCATGCCAACGTCATCCGCTACATCGTGTGCCGGGCGTTGCAGTTCCCTCCGGAAGGCTGGCT
CCGCCTGTCTCTCAACAATGGCAGCATCACCCACCTGGTGGTCCGGCCAGACGGCCGAGTGGCACTGAGGACCCTCGGGG
ACACAGGGTTCATGCCTCCAGACAAGATCTCCCGCTCCTGA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011867 ortholog_one2one 2 retrogenes
retro_chof_1762, retro_chof_2590,
Felis catus ENSFCAG00000002503 ortholog_one2many 2 retrogenes
retro_fcat_800, retro_fcat_960,
Homo sapiens ENSG00000247077 ortholog_one2one 1 retrogene
retro_hsap_3363,
Myotis lucifugus ENSMLUG00000013646 ortholog_one2one 1 retrogene
retro_mluc_1270,
Macaca mulatta ENSMMUG00000015466 ortholog_one2one 1 retrogene
retro_mmul_2101,
Mustela putorius furo ENSMPUG00000002639 ortholog_one2one 1 retrogene
retro_mputfur_684,
Pan troglodytes ENSPTRG00000005657 ortholog_one2one 1 retrogene
retro_ptro_2286,
Rattus norvegicus ENSRNOG00000037443 ortholog_one2one 1 retrogene
retro_rnor_1597,
Sus scrofa ENSSSCG00000026764 ortholog_one2one 1 retrogene
retro_sscr_821,
Tursiops truncatus ENSTTRG00000010653 ortholog_one2one 1 retrogene
retro_ttru_208,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_173 75.44 74.34
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2. retro_amel_1052 63.25 51.33
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Download FASTA sequences of all ENSAMEG00000013437 retrocopies