Parental gene:

PGAM5, ENSG00000247077

Aliases:PGAM5, BXLBV68
Description:phosphoglycerate mutase family member 5 [Source:HGNC Symbol;Acc:28763]
Organism:Human (Homo sapiens)
Coordinates:12:133287404..133299228(+)


>ENSG00000247077
ATGGCGTTCCGGCAGGCGCTGCAGCTGGCGGCCTGCGGGCTGGCCGGGGGCTCGGCCGCCGTGCTCTTCTCGGCCGTGGC
GGTAGGGAAGCCGCGCGCAGGCGGGGACGCGGAGCCACGCCCGGCTGAGCCGCCGGCCTGGGCGGGGGGCGCGCGGCCGG
GCCCCGGTGTCTGGGACCCCAACTGGGACAGGCGAGAACCACTGTCTCTGATCAACGTGCGGAAGAGGAACGTGGAATCT
GGGGAAGAAGAGCTGGCGTCCAAGCTGGACCACTACAAAGCCAAGGCCACGCGGCACATCTTCCTCATCAGGCATTCCCA
GTACCACGTGGATGGCTCCCTGGAGAAGGACCGCACTCTGACCCCGCTGGGTCGGGAGCAGGCTGAACTCACTGGGCTCC
GCCTGGCAAGCTTGGGGTTGAAGTTTAATAAAATCGTCCATTCGTCTATGACGCGCGCCATAGAGACCACCGATATCATC
AGCCGGCACCTGCCAGGCGTCTGCAAAGTCAGCACAGATCTGCTGCGGGAAGGCGCCCCCATCGAGCCAGACCCGCCCGT
GTCTCATTGGAAGCCGGAAGCTGTGCAGTATTACGAAGACGGAGCCCGGATCGAGGCCGCCTTCCGGAACTACATCCACC
GCGCAGATGCCAGGCAGGAGGAGGACAGTTACGAGATCTTCATCTGTCACGCCAACGTCATCCGCTACATCGTGTGCAGA
GCACTGCAGTTTCCTCCTGAAGGCTGGCTCCGGCTCTCCCTCAATAATGGCAGCATCACCCACCTGGTGATCCGACCCAA
CGGCCGAGTTGCGCTCAGGACCCTCGGGGACACGGGGTTCATGCCTCCCGACAAGATCACTCGATCCTGA

Library Parental gene expression (RPM)
bodymap2_adipose 20 .53 RPM
bodymap2_adrenal 23 .83 RPM
bodymap2_brain 17 .63 RPM
bodymap2_breast 16 .19 RPM
bodymap2_colon 17 .44 RPM
bodymap2_heart 16 .71 RPM
bodymap2_kidney 25 .95 RPM
bodymap2_liver 32 .43 RPM
bodymap2_lung 15 .07 RPM
bodymap2_lymph_node 23 .66 RPM
bodymap2_ovary 25 .64 RPM
bodymap2_prostate 19 .71 RPM
bodymap2_skeletal_muscle 44 .20 RPM
bodymap2_testis 27 .53 RPM
bodymap2_thyroid 23 .54 RPM
bodymap2_white_blood_cells 21 .66 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013437 ortholog_one2one 2 retrogenes
retro_amel_1052, retro_amel_173,
Choloepus hoffmanni ENSCHOG00000011867 ortholog_one2one 2 retrogenes
retro_chof_1762, retro_chof_2590,
Felis catus ENSFCAG00000002503 ortholog_one2many 2 retrogenes
retro_fcat_800, retro_fcat_960,
Myotis lucifugus ENSMLUG00000013646 ortholog_one2one 1 retrogene
retro_mluc_1270,
Macaca mulatta ENSMMUG00000015466 ortholog_one2one 1 retrogene
retro_mmul_2101,
Mustela putorius furo ENSMPUG00000002639 ortholog_one2one 1 retrogene
retro_mputfur_684,
Pan troglodytes ENSPTRG00000005657 ortholog_one2one 1 retrogene
retro_ptro_2286,
Rattus norvegicus ENSRNOG00000037443 ortholog_one2one 1 retrogene
retro_rnor_1597,
Sus scrofa ENSSSCG00000026764 ortholog_one2one 1 retrogene
retro_sscr_821,
Tursiops truncatus ENSTTRG00000010653 ortholog_one2one 1 retrogene
retro_ttru_208,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3363 70.34 56.86
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Download FASTA sequences of all ENSG00000247077 retrocopies