Parental gene:

PGAM5, ENSMMUG00000015466

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:11:134013331..134016087(+)


>ENSMMUG00000015466
AGGCGAGAACCGCTCTCTCTGATCAACCTGCGGAAGAGGAATGTGGAATCTGGGGAAGAAGAGCTGGCGTCCAAGCTGGA
CCACTACAAAGCCAAGGCCACACGGCACATCTTCCTCATCAGGCACTCCCAGTACCATGTGGATGGCTCCCTGGAGAAGG
ACCGCACTCTGACCCCGCTGGGTCGGGAGCAGGCTGAACTCACGGGGCTCCGCCTCGCAAGCTTGGGGTTGAAGTTTAAT
AAAATCGTCCATTCCTCCATGACGCGCGCCATAGAGACCACTGATATCATCAGCCGGCACCTGCCAGGCGTCTGCAAAGT
CAGCACAGACCTGCTGCGGGAAGGCGCCCCCATCGAGCCAGACCCGCCTGTGTCTCACTGGAAGCCAGAAGCTGTGCAGT
ATTACGAAGACGGAGCCCGGATTGAGGCCGCCTTCCGGAACTACATCCACCGTGCAGATGCCAGGCAGGAGGAGGACAGT
TATGAGATCTTTATTTGTCACGCCAACGTCATCCGCTACATCGTATGC

Library Parental gene expression (RPM)
SRP007412_brain 6 .61 RPM
SRP007412_brain_prefrontal_cortex 17 .45 RPM
SRP007412_cerebellum 4 .71 RPM
SRP007412_heart 5 .54 RPM
SRP007412_kidney 10 .21 RPM
SRP007412_liver 13 .38 RPM
SRP007412_testis 6 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013437 ortholog_one2one 2 retrogenes
retro_amel_1052, retro_amel_173,
Choloepus hoffmanni ENSCHOG00000011867 ortholog_one2one 2 retrogenes
retro_chof_1762, retro_chof_2590,
Felis catus ENSFCAG00000002503 ortholog_one2many 2 retrogenes
retro_fcat_800, retro_fcat_960,
Homo sapiens ENSG00000247077 ortholog_one2one 1 retrogene
retro_hsap_3363,
Myotis lucifugus ENSMLUG00000013646 ortholog_one2one 1 retrogene
retro_mluc_1270,
Mustela putorius furo ENSMPUG00000002639 ortholog_one2one 1 retrogene
retro_mputfur_684,
Pan troglodytes ENSPTRG00000005657 ortholog_one2one 1 retrogene
retro_ptro_2286,
Rattus norvegicus ENSRNOG00000037443 ortholog_one2one 1 retrogene
retro_rnor_1597,
Sus scrofa ENSSSCG00000026764 ortholog_one2one 1 retrogene
retro_sscr_821,
Tursiops truncatus ENSTTRG00000010653 ortholog_one2one 1 retrogene
retro_ttru_208,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2101 64.16 97.73
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Download FASTA sequences of all ENSMMUG00000015466 retrocopies