Parental gene:

PGAM5, ENSPTRG00000005657

Aliases:None
Description:Phosphoglycerate mutase family member 5 [Source:UniProtKB/TrEMBL;Acc:K7DH40]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:12:133719011..133729375(+)


>ENSPTRG00000005657
ATGGCGTTCCGGCAGGCGCTGCAGCTGGCGGCCTGCGGGCTGGCCGGGGGCTCGGCCGCCGTGCTCTTCTCGGCCGTGGC
GGTAGGGAAGCCGCGCGCAGGCGGGGACGCGGAGCCACGCCCGGCTGAGCCGCCGGCCTGGGCGGGGGGCGCGCGGCCGG
GCCCCGGTGTCTGGGACCCCAACTGGGACAGGCGAGAACCACTGTCTCTGATCAACGTGCGGAAGAGGAACGTGGAATCT
GGGGAAGAAGAGCTGGCGTCCAAGCTGGACCACTACAAAGCCAAGGCCACGCGGCACATCTTCCTCATCAGGCATTCCCA
GTACCACGTGGATGGCTCCCTGGAGAAGGACCGCACTCTGACCCCGCTGGGTCGGGAGCAGGCTGAACTCACTGGGCTCC
GCCTGGCAAGCTTGGGGTTGAAGTTTAATAAAATCGTCCATTCGTCTATGACCCGCGCCATAGAGACCACCGATATCATC
AGCCGGCACCTGCCAGGCGTCTGCAAAGTCAGCACAGATCTGCTGCGGGAAGGCGCCCCCATCGAGCCAGACCCGCCCGT
GTCTCACTGGAAGCCGGAAGCTGTGCAGTATTACGAAGACGGAGCCCGGATCGAGGCCGCCTTCCGGAACTACATCCACC
GCGCAGATGCCAGGCAGGAGGAGGACAGTTACGAGATCTTCATTTGTCACGCCAACGTCATCCGCTACATCGTGTGCAGA
GCACTGCAGTTTCCTCCTGAAGGCTGGCTCCGGCTCTCCCTCAATAATGGCAGCATCACCCACCTGGTGATCCGACCCAA
CGGCCGAGTTGCGCTCAGGACCCTCGGGGACACGGGGTTCATG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 12 .91 RPM
SRP007412_cerebellum 13 .87 RPM
SRP007412_heart 7 .17 RPM
SRP007412_kidney 12 .92 RPM
SRP007412_liver 17 .19 RPM
SRP007412_testis 12 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013437 ortholog_one2one 2 retrogenes
retro_amel_1052, retro_amel_173,
Choloepus hoffmanni ENSCHOG00000011867 ortholog_one2one 2 retrogenes
retro_chof_1762, retro_chof_2590,
Felis catus ENSFCAG00000002503 ortholog_one2many 2 retrogenes
retro_fcat_800, retro_fcat_960,
Homo sapiens ENSG00000247077 ortholog_one2one 1 retrogene
retro_hsap_3363,
Myotis lucifugus ENSMLUG00000013646 ortholog_one2one 1 retrogene
retro_mluc_1270,
Macaca mulatta ENSMMUG00000015466 ortholog_one2one 1 retrogene
retro_mmul_2101,
Mustela putorius furo ENSMPUG00000002639 ortholog_one2one 1 retrogene
retro_mputfur_684,
Rattus norvegicus ENSRNOG00000037443 ortholog_one2one 1 retrogene
retro_rnor_1597,
Sus scrofa ENSSSCG00000026764 ortholog_one2one 1 retrogene
retro_sscr_821,
Tursiops truncatus ENSTTRG00000010653 ortholog_one2one 1 retrogene
retro_ttru_208,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2286 68.28 51.60
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Download FASTA sequences of all ENSPTRG00000005657 retrocopies