Parental gene:

SEPHS1, ENSAMEG00000013555

Aliases:None
Description:selenophosphate synthetase 1 [Source:HGNC Symbol;Acc:19685]
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL193305.1:404004..428930(-)


>ENSAMEG00000013555
ATGTCTACGCGGGAGTCCTTTAACCCGGAAAGTTATGAATTGGACAAGAGCTTCCGGCTAACCAGATTCACTGAACTGAA
GGGCACCGGCTGCAAAGTGCCCCAAGATGTCCTGCAGAAATTGCTGGAATCCTTACAGGAGAACCACTTCCAAGAAGATG
AGCAGTTTCTGGGAGCAGTTATGCCAAGGCTTGGCATTGGAATGGATACTTGCGTCATTCCTTTGAGGCATGGCGGTCTC
TCTTTGGTTCAGACCACGGATTACATCTATCCTATCGTGGATGATCCTTACATGATGGGCAGGATAGCATGTGCCAACGT
CCTCAGTGACCTCTACGCCATGGGGGTCACGGAATGTGACAATATGCTGATGCTCCTTGGAATCAGTAACAAAATGACTG
ACAGGGAGAGGGATAAAGTGATGCCCCTAATTATTCAGGGTTTTAAAGACGCAGCAGAGGAGGCAGGGACGTCTGTGACT
GGTGGCCAGACGGTGTTAAACCCCTGGATTGTTCTGGGAGGAGTGGCCACAACTGTCTGCCAGCCCAATGAATTTATCAT
GCCGGATAACGCGGTGCCAGGGGATGTGCTTGTGCTGACGAAGCCCCTGGGGACGCAGGTGGCTGTGGCTGTGCACCAGT
GGCTGGACATTCCTGAAAAATGGAATAAGATCAAACTAGTGGTTACCCAAGAAGACGTCGAGTTGGCGTACCAGGAGGCA
ATGATGAACATGGCGAGGCTCAACAGAACAGCTGCGGGGCTCATGCACACATTCAATGCCCACGCCGCCACGGACATCAC
GGGCTTTGGAATTTTGGGTCACGCACAGAACCTGGCCAAGCAGCAGAGGAACGAGGTGTCTTTCGTGATCCACAACCTTC
CTGTCCTGGCCAAGATGGCTGCTGTGAGCAAGGCCTGTGGAAACATGTTTGGCCTCATGCACGGGACCTGCCCGGAGACA
TCAGGAGGCCTCCTAATCTGTTTACCACGAGAGCAAGCCGCCCGGTTCTGTGCAGAGATCAAGTCTCCCAAATACGGGGA
AGGCCACCAAGCATGGATTATTGGGATCGTGGAGAAGGGCAACCGCACGGCCAGAATCATAGACAAGCCCCGGATCATCG
AAGTCGCACCGCAGGTGGCCACTCAGAACGTGAACCCCACCCCGGGGGCCACCTCTTAA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000004743 ortholog_one2one 2 retrogenes
retro_cfam_1787, retro_cfam_250,
Callithrix jacchus ENSCJAG00000009494 possible_ortholog 2 retrogenes
retro_cjac_166, retro_cjac_2219,
Loxodonta africana ENSLAFG00000004670 ortholog_one2one 1 retrogene
retro_lafr_125,
Macaca mulatta ENSMMUG00000021233 possible_ortholog 4 retrogenes
retro_mmul_1607, retro_mmul_2495, retro_mmul_2647, retro_mmul_922,
Nomascus leucogenys ENSNLEG00000012205 possible_ortholog 7 retrogenes
retro_nleu_1868, retro_nleu_2211, retro_nleu_234, retro_nleu_2668, retro_nleu_2873, retro_nleu_3004, retro_nleu_327,
Procavia capensis ENSPCAG00000015617 ortholog_one2one 1 retrogene
retro_pcap_341,
Rattus norvegicus ENSRNOG00000018125 possible_ortholog 1 retrogene
retro_rnor_59,
Tursiops truncatus ENSTTRG00000011114 ortholog_one2one 1 retrogene
retro_ttru_649,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_21 82.48 80.10
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Download FASTA sequences of all ENSAMEG00000013555 retrocopies