Parental gene:

SEPHS1, ENSPCAG00000015617

Aliases:None
Description:selenophosphate synthetase 1 [Source:HGNC Symbol;Acc:19685]
Organism:Hyrax (Procavia capensis)
Coordinates:scaffold_6558:22391..44597(+)


>ENSPCAG00000015617
ATGTCTGTGCGGGAGTCCTTTAACCCAGAAAGTTATGAATTGGACAAGAGTTTCCGGCTAACCAAATTCACTGAACTGAA
GGGCACAGGCTGCAAAGTGCCCCAAGATGTCTTGCAGAAATTGCTGGAATCCTTACAAGAAAACCACTTCCAAGAAGATG
AGCAGTTTCTGGGAGCAGTTATGCCAAGGCTGGGCATTGGAATGGATACCTGTGTCATTCCTTTGAGGCATGGTGGCCTT
TCCTTGGTTCAGACCACGGATTACATTTACCCTATTGTAGATGACCCTTACATGATGGGCAGGATAGCATGTGCCAATGT
CCTCAGTGACCTCTACGCAATGGGAGTCACAGAATGTGATAACATGTTGATGCTCCTCGGAATTAGCAATAAAATGACTG
ACAGGGAAAGGGATAAAGTGATGCCCCTAATTATACAGGGTTTTAAAGATGCGGCAGAGGAAGCTGGGACATCTGTAACA
GGTGGCCAAACAGTATTAAACCCCTGGATTGTTCTGGGAGGAGTTGCTACAACTGTCTGCCAGCCCAATGAATTTATCAT
GCCAGATAATGCAGTGCCGGGAGATGTGCTTGTGTTGACGAAACCACTGGGTACACAGGTAGCAGTTGCTGTGCACCAGT
GGCTGGATATTCCCGAAAAATGGAATAAAATTAAACTAGTGGTTACCCAAGAAGATGTAGAGTTGGCGTACCAAGAAGCA
ATGATGAACATGGCAAGGCTCAACAGAACAGCTGCAGGACTCATGCACACGTTCAATGCCCATGCAGCCACTGACATCAC
GGGCTTTGGAATCCTGGGCCATGCACAGAACCTGGCCAAGCAGCAGAGGAACGAAGTGTCCTTTGTGATTCACAACCTCC
CTGTTCTGGCCAAGATGGCGGCTGTCAGCAAAGCCTGTGGAAACATGTTTGGCCTCATGCATGGGACCTGCCCAGAGACA
TCAGGAGGTCTTCTGATCTGTCTGCCACGGGAGCAAGCTGCTCGGTTCTGTGCAGAGATTAAGTCCCCTAAATACGGTGA
AGGTCACCAAGCATGGATTATTGGGATTGTAGAGAAAGGCAACCGCACCGCCAGAATCATAGACAAACCCCGGATCATCG
AAGTTGCACCACAAGTGGCCACTCAAAATGTGAACCCCACACCTGGTGCCACCTCTTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013555 ortholog_one2one 1 retrogene
retro_amel_21,
Canis familiaris ENSCAFG00000004743 ortholog_one2one 2 retrogenes
retro_cfam_1787, retro_cfam_250,
Callithrix jacchus ENSCJAG00000009494 possible_ortholog 2 retrogenes
retro_cjac_166, retro_cjac_2219,
Loxodonta africana ENSLAFG00000004670 ortholog_one2one 1 retrogene
retro_lafr_125,
Macaca mulatta ENSMMUG00000021233 possible_ortholog 4 retrogenes
retro_mmul_1607, retro_mmul_2495, retro_mmul_2647, retro_mmul_922,
Nomascus leucogenys ENSNLEG00000012205 possible_ortholog 7 retrogenes
retro_nleu_1868, retro_nleu_2211, retro_nleu_234, retro_nleu_2668, retro_nleu_2873, retro_nleu_3004, retro_nleu_327,
Rattus norvegicus ENSRNOG00000018125 possible_ortholog 1 retrogene
retro_rnor_59,
Tursiops truncatus ENSTTRG00000011114 ortholog_one2one 1 retrogene
retro_ttru_649,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pcap_341 81.93 81.89
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Download FASTA sequences of all ENSPCAG00000015617 retrocopies