Parental gene:

ENSAMEG00000017784

Aliases:None
Description:None
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL193092.1:698583..700146(+)


>ENSAMEG00000017784
CATTTTCTCTTACAGCTGTTTGCAGACAAAGTTCCAAAGACAGCAGAGAACTTTCGTGCTCTGAGCACTGGGGAGAAAGG
ATTTGGTTATAAAGGTTCCTGCTTTCACAGGATTATTCCAGGATTTATGTGCCAGGGTGGGGACTTCACACGCCATAACG
GCACTGGCGGCAAGTCCATTTATGGGGAGAAGTTTGATAATGAGAATTTCGTCCTGAAGCACACGGGTCCTGGCATCCTG
TCCATGGCCAACGCAGGACCCAACACAAACGGTTCCCAGTTCTTCATCTGCACTGCCAAGACCGAGTGGTTGGATGGCAA
GCACGTGGTCTTCGGTAAGGTCAAAGAGGGCATGAACATCGTGGAGGCCATGGAACGCTTCGGGTCCAGGAACGGCAAGA
CGAGCAAGAAGATCACCATTGCTGACTGTGGACAGATCTAA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011597 possible_ortholog 12 retrogenes
retro_chof_1071, retro_chof_1276, retro_chof_1317, retro_chof_1335, retro_chof_1876, retro_chof_1955, retro_chof_1959, retro_chof_2687, retro_chof_336, retro_chof_632, retro_chof_652, retro_chof_929,
Felis catus ENSFCAG00000009159 ortholog_one2one 18 retrogenes
retro_fcat_1066, retro_fcat_1146, retro_fcat_12, retro_fcat_1324, retro_fcat_133, retro_fcat_1348, retro_fcat_1517, retro_fcat_1710, retro_fcat_1733, retro_fcat_1739, retro_fcat_1914, retro_fcat_1928, retro_fcat_372, retro_fcat_504, retro_fcat_531, retro_fcat_676, retro_fcat_684, retro_fcat_827,
Macropus eugenii ENSMEUG00000002016 possible_ortholog 20 retrogenes
retro_meug_1024, retro_meug_1055, retro_meug_1089, retro_meug_1133, retro_meug_1269, retro_meug_1391, retro_meug_1576, retro_meug_1746, retro_meug_1880, retro_meug_1975, retro_meug_2013, retro_meug_2037, retro_meug_260, retro_meug_297, retro_meug_301, retro_meug_437, retro_meug_478, retro_meug_510, retro_meug_713, retro_meug_73,
Monodelphis domestica ENSMODG00000016089 possible_ortholog 9 retrogenes
retro_mdom_1373, retro_mdom_1524, retro_mdom_1856, retro_mdom_1884, retro_mdom_215, retro_mdom_272, retro_mdom_29, retro_mdom_730, retro_mdom_85,
Mustela putorius furo ENSMPUG00000018190 ortholog_one2one 2 retrogenes
retro_mputfur_101, retro_mputfur_22,
Sorex araneus ENSSARG00000007250 ortholog_one2one 1 retrogene
retro_sara_484,
Sarcophilus harrisii ENSSHAG00000017062 possible_ortholog 3 retrogenes
retro_shar_164, retro_shar_383, retro_shar_750,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_76 76.03 100.00
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2. retro_amel_266 64.21 63.70
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3. retro_amel_365 72.60 97.95
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4. retro_amel_398 59.29 95.21
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5. retro_amel_528 76.39 97.26
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6. retro_amel_537 91.74 74.66
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7. retro_amel_555 82.52 97.26
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8. retro_amel_621 82.52 97.26
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9. retro_amel_656 76.06 97.26
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10. retro_amel_692 75.32 51.37
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11. retro_amel_707 73.43 97.26
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12. retro_amel_721 79.82 77.40
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13. retro_amel_763 75.25 67.81
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14. retro_amel_793 72.46 93.84
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15. retro_amel_812 78.62 97.95
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16. retro_amel_984 76.22 97.26
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17. retro_amel_1032 61.54 61.64
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18. retro_amel_1036 74.82 93.84
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19. retro_amel_1141 75.69 95.89
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20. retro_amel_1259 70.95 97.95
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21. retro_amel_1264 79.17 81.51
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22. retro_amel_1440 66.94 81.51
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23. retro_amel_1516 69.01 95.21
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24. retro_amel_1520 81.43 95.21
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25. retro_amel_1524 70.54 87.67
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26. retro_amel_1687 79.72 97.95
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27. retro_amel_1713 68.12 93.84
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28. retro_amel_1731 81.94 98.63
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29. retro_amel_1786 75.71 93.84
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30. retro_amel_1862 71.83 96.58
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Download FASTA sequences of all ENSAMEG00000017784 retrocopies