Parental gene:

ENSSHAG00000017062

Aliases:None
Description:None
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL834671.1:2483836..2486489(+)


>ENSSHAG00000017062
TTTGTACATCGGTGGGTTTTTTTAAAAGTTGAAACTTGTCCAGAATCTCTAGTTGAGGGTAAACTTGAACTCTTTGCAGA
CAAGGTTCCAAAGACAGCAGAAAACTTCCGTGCCCTGAGCACTGGAGAGAAGGGATTTGGTTACAAGGGATCCTGCTTCC
ACAGAATCATTCCTGGGTTCATGTGCCAGGGTGGTGACTTCACACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGG
GAGAAATTTGCTGATGAGAACTTCATCCTGAAGCATACTGGTCCTGGCATCTTGTCCATGGCAAATGCTGGACCCAACAC
AAATGGCTCCCAGTTTTTCATCTGTACTGCTAAGACTGATTGGTTGGATGGCAAGCATGTGGTCTTTGGCCAAGTGAAAG
AAGGCATGAACATTGTGGAAGCCATGGAGCGTTTTGGTTCTCGGGATGGCAAGACCAGCAAGAAGATCACCATTGCTGAC
TGTGGACAACTCTCATAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017784 possible_ortholog 30 retrogenes
Bos taurus ENSBTAG00000012003 possible_ortholog 12 retrogenes
Choloepus hoffmanni ENSCHOG00000011597 possible_ortholog 12 retrogenes
Callithrix jacchus ENSCJAG00000011969 possible_ortholog 54 retrogenes
Echinops telfairi ENSETEG00000002186 possible_ortholog 21 retrogenes
Felis catus ENSFCAG00000009159 possible_ortholog 18 retrogenes
Homo sapiens ENSG00000196262 possible_ortholog 78 retrogenes
Gorilla gorilla ENSGGOG00000026298 possible_ortholog 4 retrogenes
Gorilla gorilla ENSGGOG00000027442 possible_ortholog 1 retrogene
Loxodonta africana ENSLAFG00000011345 possible_ortholog 1 retrogene
Macropus eugenii ENSMEUG00000002016 ortholog_one2one 20 retrogenes
Macaca mulatta ENSMMUG00000016638 possible_ortholog 10 retrogenes
Monodelphis domestica ENSMODG00000016089 ortholog_one2many 9 retrogenes
Mustela putorius furo ENSMPUG00000018190 possible_ortholog 2 retrogenes
Mus musculus ENSMUSG00000071866 possible_ortholog 2 retrogenes
Oryctolagus cuniculus ENSOCUG00000016662 possible_ortholog 3 retrogenes
Otolemur garnettii ENSOGAG00000027997 possible_ortholog 31 retrogenes
Pongo abelii ENSPPYG00000017586 possible_ortholog 12 retrogenes
Pongo abelii ENSPPYG00000017587 possible_ortholog 4 retrogenes
Pan troglodytes ENSPTRG00000023064 possible_ortholog 77 retrogenes
Rattus norvegicus ENSRNOG00000006423 possible_ortholog 2 retrogenes
Sorex araneus ENSSARG00000007250 possible_ortholog 1 retrogene
Ictidomys tridecemlineatus ENSSTOG00000010215 possible_ortholog 10 retrogenes
Tupaia belangeri ENSTBEG00000017484 possible_ortholog 77 retrogenes
Tarsius syrichta ENSTSYG00000008973 possible_ortholog 23 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_164 52.03 87.27
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2. retro_shar_383 54.48 79.39
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3. retro_shar_750 73.38 83.03
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Download FASTA sequences of all ENSSHAG00000017062 retrocopies