Parental gene:

ENSCHOG00000011597

Aliases:None
Description:None
Organism:Sloth (Choloepus hoffmanni)
Coordinates:scaffold_25658:15881..19069(+)


>ENSCHOG00000011597
ATGGTGAACCCCACCGTGTTCTTCGACATCGCCGCCGACGGCGAGCCCATAGGCCGCATCTACTTCGAGCTGTTTGCAGA
TAAAGTTCCAAAGACAGCAGAAAACTTCCGTGCTCTGAGCACTGGGGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTC
ACAGAATTATTCCTGGGTTTATGTGCCAGGGTGGTGACTTCACACGCCATAACGGCACTGGTGGCAAGTCCATCTACGGG
GAGAAGTTTGATGATGAGAACTTCATCCTGAAGCATACAGGTCCTGGCATCTTGTCCATGGCTAATGCTGGACCCAACAC
AAATGGTTCCCAGTTTTTCATCTGCACTGCTAAGACAGAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017784 possible_ortholog 30 retrogenes
retro_amel_1032, retro_amel_1036, retro_amel_1141, retro_amel_1259, retro_amel_1264, retro_amel_1440, retro_amel_1516, retro_amel_1520, retro_amel_1524, retro_amel_1687, retro_amel_1713, retro_amel_1731, retro_amel_1786, retro_amel_1862, retro_amel_266, retro_amel_365, retro_amel_398, retro_amel_528, retro_amel_537, retro_amel_555, retro_amel_621, retro_amel_656, retro_amel_692, retro_amel_707, retro_amel_721, retro_amel_76, retro_amel_763, retro_amel_793, retro_amel_812, retro_amel_984,
Dipodomys ordii ENSDORG00000003705 ortholog_one2many 12 retrogenes
retro_dord_101, retro_dord_107, retro_dord_150, retro_dord_181, retro_dord_183, retro_dord_319, retro_dord_394, retro_dord_446, retro_dord_46, retro_dord_518, retro_dord_537, retro_dord_585,
Felis catus ENSFCAG00000009159 possible_ortholog 18 retrogenes
retro_fcat_1066, retro_fcat_1146, retro_fcat_12, retro_fcat_1324, retro_fcat_133, retro_fcat_1348, retro_fcat_1517, retro_fcat_1710, retro_fcat_1733, retro_fcat_1739, retro_fcat_1914, retro_fcat_1928, retro_fcat_372, retro_fcat_504, retro_fcat_531, retro_fcat_676, retro_fcat_684, retro_fcat_827,
Macropus eugenii ENSMEUG00000002016 possible_ortholog 20 retrogenes
retro_meug_1024, retro_meug_1055, retro_meug_1089, retro_meug_1133, retro_meug_1269, retro_meug_1391, retro_meug_1576, retro_meug_1746, retro_meug_1880, retro_meug_1975, retro_meug_2013, retro_meug_2037, retro_meug_260, retro_meug_297, retro_meug_301, retro_meug_437, retro_meug_478, retro_meug_510, retro_meug_713, retro_meug_73,
Monodelphis domestica ENSMODG00000016089 possible_ortholog 9 retrogenes
retro_mdom_1373, retro_mdom_1524, retro_mdom_1856, retro_mdom_1884, retro_mdom_215, retro_mdom_272, retro_mdom_29, retro_mdom_730, retro_mdom_85,
Mustela putorius furo ENSMPUG00000018190 possible_ortholog 2 retrogenes
retro_mputfur_101, retro_mputfur_22,
Sorex araneus ENSSARG00000007250 possible_ortholog 1 retrogene
retro_sara_484,
Sarcophilus harrisii ENSSHAG00000017062 possible_ortholog 3 retrogenes
retro_shar_164, retro_shar_383, retro_shar_750,
Tursiops truncatus ENSTTRG00000002964 possible_ortholog 16 retrogenes
retro_ttru_1176, retro_ttru_1177, retro_ttru_1178, retro_ttru_1232, retro_ttru_1294, retro_ttru_1372, retro_ttru_1429, retro_ttru_1571, retro_ttru_222, retro_ttru_287, retro_ttru_298, retro_ttru_503, retro_ttru_623, retro_ttru_68, retro_ttru_763, retro_ttru_906,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_336 64.86 60.00
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2. retro_chof_632 70.41 81.67
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3. retro_chof_652 78.57 80.83
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4. retro_chof_929 63.44 75.83
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5. retro_chof_1071 69.79 79.17
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6. retro_chof_1276 82.65 80.83
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7. retro_chof_1317 72.97 90.83
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8. retro_chof_1335 75.34 59.17
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9. retro_chof_1876 71.58 79.17
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10. retro_chof_1955 60.00 65.00
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11. retro_chof_1959 78.48 65.00
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12. retro_chof_2687 75.34 59.17
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Download FASTA sequences of all ENSCHOG00000011597 retrocopies