Parental gene:

HMGN3, ENSBTAG00000001422

Aliases:None
Description:High mobility group nucleosome-binding domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q3ZBV4]
Organism:Cow (Bos taurus)
Coordinates:9:19000363..19035860(-)


>ENSBTAG00000001422
ATGCCGAAGAGAAAGTCTCCAGAGAATACAGAGGGGAAGGATGGATCCAAAGTAACTAAACAGGAGCCCACCAGACGGTC
TGCCAGGTTGTCAGCGAAACCTGCTCCCCCCAAACCTGAACCTAAACCAAGAAAAACATCTGCTAAGAAAGAACCGGCAG
CAAAGGTTAGCAAAGGTGTTAAAGGGAAGAAGGAGGAGAAGCAGGAAGCTGGAAAGGAAGGTACCGCAGCACCGTCTGAA
AATGGTGACACTAAAACTGAAGAGGCACAGAAAACTGAATCTGTAGCTAACGAGGGAGAATGA

Library Parental gene expression (RPM)
ERP005899_liver 49 .17 RPM
ERP005899_muscle 42 .34 RPM
SRP017611_brain 14 .11 RPM
SRP017611_kidney 59 .92 RPM
SRP017611_liver 13 .44 RPM
SRP030211_testis 36 .33 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011031 ortholog_one2one 1 retrogene
retro_amel_1920,
Canis familiaris ENSCAFG00000002809 ortholog_one2one 1 retrogene
retro_cfam_1013,
Choloepus hoffmanni ENSCHOG00000007015 ortholog_one2one 1 retrogene
retro_chof_2241,
Callithrix jacchus ENSCJAG00000010800 ortholog_one2one 2 retrogenes
retro_cjac_1626, retro_cjac_819,
Mustela putorius furo ENSMPUG00000018092 ortholog_one2one 1 retrogene
retro_mputfur_1164,
Otolemur garnettii ENSOGAG00000016487 ortholog_one2one 1 retrogene
retro_ogar_190,
Pongo abelii ENSPPYG00000016791 ortholog_one2one 1 retrogene
retro_pabe_421,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1524 66.67 59.00
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2. retro_btau_1558 68.33 59.00
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Download FASTA sequences of all ENSBTAG00000001422 retrocopies