Parental gene:

HMGN3, ENSCHOG00000007015

Aliases:None
Description:high mobility group nucleosomal binding domain 3 [Source:HGNC Symbol;Acc:12312]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_2520:10551..39162(-)


>ENSCHOG00000007015
ATGCCGAAGAGAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCACAAGACGGTC
TGCCAGATTGTCAGCGAAACCTGCTCCACCAAAACCTGAACCTAAACCAAGAAAAACATCTGCTAAGAAAGAACCTGCAA
CAAAGATTAACAAAGGTGCTAGAGGGAAGAAGGAGGAAAAGCAGGAAGCTGGAAAGGAAGGTACTGCACCATCTGAAAAT
GGTGAAAATAGAACTGAAGAGGCACAGAAAATTGAATCTGTAGATAACGAGGGAGAATGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011031 ortholog_one2one 1 retrogene
retro_amel_1920,
Bos taurus ENSBTAG00000001422 ortholog_one2one 2 retrogenes
retro_btau_1524, retro_btau_1558,
Canis familiaris ENSCAFG00000002809 ortholog_one2one 1 retrogene
retro_cfam_1013,
Callithrix jacchus ENSCJAG00000010800 ortholog_one2one 2 retrogenes
retro_cjac_1626, retro_cjac_819,
Cavia porcellus ENSCPOG00000012407 ortholog_one2one 2 retrogenes
retro_cpor_1399, retro_cpor_147,
Felis catus ENSFCAG00000028793 ortholog_one2one 1 retrogene
retro_fcat_1400,
Homo sapiens ENSG00000118418 ortholog_one2one 1 retrogene
retro_hsap_231,
Gorilla gorilla ENSGGOG00000006910 ortholog_one2one 1 retrogene
retro_ggor_293,
Macaca mulatta ENSMMUG00000004351 ortholog_one2one 1 retrogene
retro_mmul_414,
Mustela putorius furo ENSMPUG00000018092 ortholog_one2one 1 retrogene
retro_mputfur_1164,
Nomascus leucogenys ENSNLEG00000012377 ortholog_one2one 2 retrogenes
retro_nleu_68, retro_nleu_851,
Otolemur garnettii ENSOGAG00000016487 ortholog_one2many 1 retrogene
retro_ogar_190,
Ochotona princeps ENSOPRG00000009611 ortholog_one2one 1 retrogene
retro_opri_799,
Pongo abelii ENSPPYG00000016791 ortholog_one2one 1 retrogene
retro_pabe_421,
Pan troglodytes ENSPTRG00000018366 ortholog_one2one 2 retrogenes
retro_ptro_1427, retro_ptro_200,
Ictidomys tridecemlineatus ENSSTOG00000014353 ortholog_one2one 1 retrogene
retro_itri_251,
Tupaia belangeri ENSTBEG00000015468 ortholog_one2one 3 retrogenes
retro_tbel_1912, retro_tbel_4714, retro_tbel_615,
Tarsius syrichta ENSTSYG00000005238 ortholog_one2one 3 retrogenes
retro_tsyr_1569, retro_tsyr_268, retro_tsyr_976,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_2241 61.84 75.76
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Download FASTA sequences of all ENSCHOG00000007015 retrocopies