Parental gene:

UTP14A, ENSBTAG00000013671

Aliases:UTP14A, UTP14C
Description:U3 small nucleolar RNA-associated protein 14 homolog A [Source:UniProtKB/Swiss-Prot;Acc:Q3T0Q8]
Organism:Cow (Bos taurus)
Coordinates:X:13790536..13807198(+)


>ENSBTAG00000013671
ATGAACGCGAACCAGGCTGCGGAGAGCAACCTTCTGGCTTCGAACCAACAGAAAGAACTAGAGGATTTGCCAAAAGACTA
CCCCTTGAGCACTAGTGAAGATGAGGGGGACAAAGATGAAGAAAGAAAGCATCAGAAGCTTCTGGAATCAATCAGTTCAC
TTAATGGAAAGGATAGGCAGAAATTGGCTGATAGGTCTGAGGCTAGTCTGAAGGTGTCAGAGTTCAGTGTAAGTTCTGAA
GGATCAGGAGAAAAGCTGGTCCTTTCAGATCTGCTTGAGCCTGTTAAAACTTCATCCTCATTGGCTGCTGTGAAAAAGCA
GCTGAATCGAGTGAAATCGAAGAAGACTGTGGAGCTACCACTTCACAGAGAAGAGATTGAGCGGATCCACAGAGAAGTGG
CATTCAATAAAAGCTCCCAAATCCTCTCCAAATGGGATCCTGTCGTTCTGAAGAATCGGCAAGCAGAGCAGCTGGTTTTT
CCCCTGAGCAAGCCCCAATCAGCCTTTGCTCCCATTGAACATGTGGTCAATGGCTGGAAGGCAGGAACTCCCCTGGAGCA
GGAGATTTTTAATCTTCTCCATAAGAACAAGCAGCCCGTGACAGACCCTTTACTGACTCCCGTGGAAAAGGCCTCTCTCA
AAGCTATGAGCCTGGAAGAGGTAAAGATGCGCCGAGCAGAGCTTCAAAGGGCCCGGGCCCTGCAATCCTACTATGAGGCC
AGGGCTCGAAGAGAGAAGAGAATCAAAAGCAAAAAGTATCACAGAATTCTGAAGAAAGGAAAGGCCAAGCAAGCCTTAAA
AGATTTTGAGAAGTTGCAGAAGGTCAATCCTGCTGCAGCACTAGAAGAACTAGAAAAACTTGACAAGGCCAGAATGATGG
AGCGAATGAGCCTTAAGCACCAGAACAGTGGGAAATGGGCAAAATCAAAGGCAATTATGGCCAAATATGACCTGGAGGCT
CGCCAGGCTATGCAGGAACAGCTGGCCAGGAACAAAGAGCTGACGCAGAAGGTCCGGGCGGCCTCTGAGAGTGAGGAAGA
GGGGGAAGGCCAGGAGGAGGAGGAAGAACCTCTTGTCCCTGACCTGGTGAATGAGGTGCAGATAAAGGCAAATGGACTGA
ACCCCTGGATGTTCCGGAATCACTTCATTGATGCCAAAGAGGCTGAGGTCCAGAAAGACCTGGAAGATCCTGCTGAGCCT
GAAGCCCAGGAGACTTCTGAAAGTGAGGAAGAAAAAGCAGTGGTGGAGGAAGAAACTCTCTTGAAAGAATTTGAGGAAAG
GCGATCACTTAGACAGAAGTCTGAGCTCAATCACATGGCAGAGCCTGTGCACAGACGTGTAACAAAGGATCCTAGCAGCC
AGGAGGTGCTGTCCGATTTGAGGGCACTGTGTCAGAAACTCCGCACGGAGAACCATCAGTCAGGGAAGCAAGAACTGAGT
TCAGCGAGGACAGCTCAGAGAGAGGAACCTGCCAGGGAGGAAGAGGAGCCCATGTTGCTGCAGAGGCCAGAGAGAGCTCG
GACTCTGGACGAGCTGGAGGAGCTGGGCAGAGAAGGGTGTGTTGAAAACGAGGAGCTTCCCAGAACTGCAGTAGAAGGGC
TGCAGTTGGAGAAGAATCTAAGTAATCATATTGGCGCCCCCAAGGAGAAGAAAAGGAAGGAGCAAATGATTGATCTCCAG
AACCTCCTAACCACAAAATCGCCTTCCGTGAAGTCCTTGGCAGTTCCCACAACCGTACAGGAGTTGGAAGATGAAGAAGA
GAGAGATCAAAGGCAGATAATAAAGGAAGCTTTTGCTGGGGATGATGTCATCAGAGACTTCTTGAAAGAGAAGAGGGAAG
CTGTGGAGGCGAGTAAGCCAAAGGACCTGGACCTGACTCTGCCTGGCTGGGGCGAGTGGGGTGGCATAGGCCTGAAGCCC
AGTGCCAAGAAGAGACGCCGGTTTCTCATTAAAGCCCCTGAGGGTCCTCCAAGGAAAGACAAGAATTTGCCAAACGTGAT
TATCAATGAGAAGCGGAACACCCATGCAGCAGCTCATCAGGTGCAGGTGCTTCCACATCCATTCACACACCATCAACAAT
TTGAAAGGACCATCCAGACCCCCGTAGGATCTACATGGAACACCCAGAGGGCCTTCCAAAAGCTGACCATGCCCAAGGTT
GTCACCAAGCCAGGCCATATCATTAAGCCTATCAAAGCAGAGGATGTGGGCTACCGATCTTCCTCAAGGTCGGACCTCTC
TGTCGTACAGAGGAATCCAAAACGACTCTCCATACGTCACAAAAAACACCTGGAGAATAACTGTGTGGATTGA

Library Parental gene expression (RPM)
SRP017611_brain 71 .90 RPM
SRP017611_kidney 81 .74 RPM
SRP017611_liver 31 .94 RPM
ERP005899_muscle 178 .16 RPM
ERP005899_liver 40 .59 RPM
SRP030211_testis 8 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000014231 ortholog_one2many 2 retrogenes
retro_cpor_1272, retro_cpor_242,
Dasypus novemcinctus ENSDNOG00000002180 ortholog_one2many 1 retrogene
retro_dnov_1479,
Homo sapiens ENSG00000156697 ortholog_many2many 1 retrogene
retro_hsap_29,
Gorilla gorilla ENSGGOG00000014930 ortholog_many2many 1 retrogene
retro_ggor_163,
Loxodonta africana ENSLAFG00000016653 ortholog_many2many 1 retrogene
retro_lafr_110,
Myotis lucifugus ENSMLUG00000001984 ortholog_many2many 2 retrogenes
retro_mluc_1643, retro_mluc_308,
Macaca mulatta ENSMMUG00000020700 ortholog_many2many 1 retrogene
retro_mmul_35,
Mus musculus ENSMUSG00000063785 ortholog_many2many 1 retrogene
retro_mmus_261,
Nomascus leucogenys ENSNLEG00000015258 ortholog_one2many 1 retrogene
retro_nleu_2091,
Procavia capensis ENSPCAG00000006070 ortholog_one2many 1 retrogene
retro_pcap_127,
Pan troglodytes ENSPTRG00000022262 ortholog_one2many 1 retrogene
retro_ptro_824,
Tarsius syrichta ENSTSYG00000009415 ortholog_one2many 1 retrogene
retro_tsyr_2104,
Tursiops truncatus ENSTTRG00000003794 ortholog_one2many 1 retrogene
retro_ttru_1687,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_133 94.16 100.00
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2. retro_btau_1706 87.53 99.74
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Download FASTA sequences of all ENSBTAG00000013671 retrocopies