Parental gene:

ENSPCAG00000006070

Aliases:None
Description:None
Organism:Hyrax (Procavia capensis)
Coordinates:GeneScaffold_4745:8241..29251(+)


>ENSPCAG00000006070
ATGAGTGCGGCCTCAGCAGAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGGGGACAGTGATGGAGAAAGGAAGCATCAGAAGCTTCTGGAAGCAATCAGTTCCCTTGATG
GAAAGAACAGGCGGAAATTGGCTGAGAGATCAGAAGCTAGTCTGAAGGTGTCAGAGTTCAATGTCAGTTCTGAAGGGACA
GGAGAAAAGCTGGTCCTTGCAGATCTGCTTCCACCCACTAAAACATCAGCATCCTTAGCTACTGTGAAAAAGCAGCTGAA
TAGAGTCAAATCAAGGAAGACTGTGGAGTTGCCCCTTAACAAAGAAGAGGTTGCGCGGATCCACAGAGAAGTGGCATTCA
ATAAAACCTCCCAAGTGCTCTCCAAATGGGACCCTATAGTTGTGAAGAACCGGAAAGCAGAGCAGCTGGTTTTCCCCCTG
GAGAAGGAGCAGCCAGCCTTTGCTCCCATTGAACATGTGCTTGGTGGCTGGAAGGCAAGAACTCCCCTGGAGCAGGAAAT
TTTTAACATCCTTCACAAAAACAAGCAGCCAGTGACTGACCCTTTATTGACTCCAGTAGAAAAGGCCTCTCTCAAAGCCA
TGAGCCTGGAAGAGGCTAAGATGCGTCGAGCTGAGCTTCAGAGGGCCCGGGCCCTGCAGTCCTACTATGAGGCCAAGGCT
CGAAGAGAGAAGAAAATCAAAAGCAAAAAGTATCACAAAGTGGTGAAGAAAGGAAAGGCCAAGAAAGCCCTAAAAGATTT
TGAGACTCTGCGGAAGGTTGATCCTACTGCCGCATTAGAAGAACTGGAAAAAATTGAAAAGGCCAGGATGATGGAGCGAA
TGAGCCTTAAGCACCAGAACAGTGGAAAGTGGGCCAAATCAAAGGCAATTATGGCCAAATATGACCTAGAGGCTCGCCAA
GCCATGCAGGAACAATTGGCCAAGAATAAAGAGCTGACACAGAAACTCCAGGCCGCATCTGAGAGTGAGGAAGAAGAGGG
AGGTGTTGAGGAGAATGAGCTCATCCCGGATGTGGTGAACGAAGTCCACACGACCACAAATGAGCCCAACCCCTGGATGC
ACAGAAGTTGCACTGGCGATACCAAGGAGGCAGAGATCCCGAAGGATGCCGGACCGCCTCACGAGCCCGTGGCCTGCGAA
GATTCAGAAAGTGAGGGGGAAGAAGGCCCAGCAGCAGAAGACACCTTGTTGGAAGAATTTGAGAAAAGGCGGTCCCTCAG
GAAAAGGCCTGAGCTCAGCCAAGATGCTGAGTCCGCAGGCAGTCAGGAAGCACAAGATGCTAGCAGCCAGGAGGTGCTAT
CTGAGTTGAGGGCACTGTCTCAGAAGCTCAACCAGAAAAAGCATCAGTCCGGGAAGCAAAAAGGGAATTCTGCAAGAACT
GTTCTCCTGGTCCAGAGAGAGGAACTGGCCCAGGAAGAGGAGGAGCCTGTCTTGCTGCAGAGGCCAGAGAGAGTACAGAC
TCTAGAAGAGCTAGAGGTGCTGGGTGAAGAAGGCTGTCTGCAAAATGCAGACCTTCCCAGACCTGTGTTACAAGGGCAGG
AGATGGAGAGCACCCCAGATAATCAGCCTGGTGCCCCTAAGGGGAAGAAAAAGAAGGAGCAAATGATTGATCTGCAGAAC
CTCCTAAGCACAAAGTCTCCTTCAGTGAAGTCTTTGGCAGTTCCCACGACAGTAGAGGCGATGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGGTCCTCCAAGGAAGGACAAGAATTTGCCCAACGTGATCAT
CAGTGATAAGCGCAACATCCACGCTGCAGCCCATCAGGTGCACGTGCTTCCATACCCATTCACTCACCATCACCAGTTTG
AAAGGACCATCCAGACCCCTATAGGATCCACGTGGAACACCCAAAGGGCCTTCCAAAAGCTGACTACTCCCAAGGTTGTC
ACCAAGCCAGGCCATATCATTAAGCCTATAAAAGCCGAGGACGTGGGCTACCGATCTTCCTCAAGGTCTGACCTCTCTAT
GGTGCAGAGGAATCCGAAACAGCTCTCCACCCGTCACAAAAAACTGCTGAAGAAAAACTCTGATTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013671 ortholog_one2many 2 retrogenes
retro_btau_133, retro_btau_1706,
Cavia porcellus ENSCPOG00000014231 ortholog_one2one 2 retrogenes
retro_cpor_1272, retro_cpor_242,
Dasypus novemcinctus ENSDNOG00000002180 ortholog_one2one 1 retrogene
retro_dnov_1479,
Homo sapiens ENSG00000156697 ortholog_one2many 1 retrogene
retro_hsap_29,
Gorilla gorilla ENSGGOG00000014930 ortholog_one2many 1 retrogene
retro_ggor_163,
Loxodonta africana ENSLAFG00000016653 ortholog_one2one 1 retrogene
retro_lafr_110,
Myotis lucifugus ENSMLUG00000001984 ortholog_one2many 2 retrogenes
retro_mluc_1643, retro_mluc_308,
Macaca mulatta ENSMMUG00000020700 ortholog_one2many 1 retrogene
retro_mmul_35,
Mus musculus ENSMUSG00000063785 ortholog_one2many 1 retrogene
retro_mmus_261,
Nomascus leucogenys ENSNLEG00000015258 ortholog_one2one 1 retrogene
retro_nleu_2091,
Pan troglodytes ENSPTRG00000022262 ortholog_one2one 1 retrogene
retro_ptro_824,
Tarsius syrichta ENSTSYG00000009415 ortholog_one2one 1 retrogene
retro_tsyr_2104,
Tursiops truncatus ENSTTRG00000003794 ortholog_one2one 1 retrogene
retro_ttru_1687,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pcap_127 68.57 63.15
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Download FASTA sequences of all ENSPCAG00000006070 retrocopies