Parental gene:

CCNB1, ENSBTAG00000014239

Aliases:None
Description:G2/mitotic-specific cyclin-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q1LZG6]
Organism:Cow (Bos taurus)
Coordinates:20:10431452..10441126(-)


>ENSBTAG00000014239
ATGGCGCTCCGGATCACCAGGAACACGAAGATTAGTGCTGAAAATAAGGCGAAGATCAGTATGGCAGGGGCCAAGCGCGT
GCCTGTGGCCGCTGTTGCAACATCTAAGCCCGGGCTGAGGCCCCGAACAGCTCTTGGAGACATCGGTAACAAAGTCAGTG
AACAACCGCAGGCCAAACTGCCTCTGAAAAAGGAAGCAAAAACTTTAGCTTCTGGAAAAGTTACTGCTAAAAAAGTACCA
AAACCTCTGGAAAAGGCTCCTGTACCTGTGCCGGAGCCCCAGCCGGAGCCAGAGCCGGAACCCGAGCATGTTAAGGAAGA
CAAACTTTCCCCCGAGCCTATTTTGGTCGATACTCCCTCTCCAAGCCCCATGGAAACATCTGGCTGTGCCCCTGCAGAAG
AGTATCTGTGTCAGGCTTTCTCAGATGTAATTCTTGCAGTGAGTGATGTGGATGCAGAAGACGGAGCGGATCCAAACCTT
TGTAGTGAATATGTAAAAGATATCTATGCTTATCTAAGACAACTTGAGGAAGAGCAAGCAGTCAAACCAAAATACCTAAT
GGGTCGTGAAGTCACTGGAAACATGAGAGCCATCCTCATTGACTGGCTAGTGCAAGTTCAAATAAAATTCAGATTACTGC
AGGAGACCATGTACATGACTGTTTCCATAATTGATCGGTTCATGCAGGATACCTATGTGCCCAAGAAGATGCTGCAGCTG
GTTGGAGTCACTGCCATGTTTGTTGCAAGCAAATATGAGGAAATGTACCCTCCAGAAATCGGTGACTTTGCCTTTGTGAC
TGACAACACCTACACCAAGTTTCAAATCAGACAGATGGAAATGAAGATTCTAAGAGCTTTAAATTTTAGTCTGGGTCGCC
CTCTACCCCTGCATTTCCTTCGGAGAGCATCTAAGATTGGAGAGGTTGATGTTGAGCTACATACTCTGGCCAAATATTTG
ATGGAACTAACTATGCTGGACTACGATATGGTGCACTTTCCTCCTTCTCAGATTGCAGCGGGAGCTTTTTGCTTAGCACT
GAAAGTTCTTGATAATGGTGAATGGACACCAACTCTACAGCATTACCTGTCATATACTGAAGAATCCCTTCTTGTTGTTA
TGCAACACCTGGCAAAGAATGTGGTCATGGTGAACCGTGGGCTCACAAAGCACATGACTATCAAGAACAAGTATGCCACA
TCTAAGCATGCTAAGATCAGCACTCTAGCACAGCTGAATTCTGCACTAGTTCAAGATTTAGCCAAGGCTGTGGCAAAGGT
GTAA

Library Parental gene expression (RPM)
ERP005899_liver 1 .30 RPM
ERP005899_muscle 13 .67 RPM
SRP017611_brain 0 .14 RPM
SRP017611_kidney 0 .53 RPM
SRP017611_liver 0 .00 RPM
SRP030211_testis 42 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000004943 within_species_paralog 1 retrogene
retro_btau_1335,
Bos taurus ENSBTAG00000005269 within_species_paralog 1 retrogene
retro_btau_1584,
Canis familiaris ENSCAFG00000007705 possible_ortholog 1 retrogene
retro_cfam_213,
Callithrix jacchus ENSCJAG00000016075 possible_ortholog 1 retrogene
retro_cjac_4137,
Cavia porcellus ENSCPOG00000014629 possible_ortholog 1 retrogene
retro_cpor_13,
Erinaceus europaeus ENSEEUG00000005724 ortholog_one2one 2 retrogenes
retro_eeur_386, retro_eeur_548,
Mustela putorius furo ENSMPUG00000014648 possible_ortholog 1 retrogene
retro_mputfur_58,
Procavia capensis ENSPCAG00000002451 ortholog_one2one 1 retrogene
retro_pcap_176,
Sarcophilus harrisii ENSSHAG00000007685 ortholog_one2one 1 retrogene
retro_shar_290,
Tupaia belangeri ENSTBEG00000011817 possible_ortholog 4 retrogenes
retro_tbel_1185, retro_tbel_3200, retro_tbel_4185, retro_tbel_4531,
Tarsius syrichta ENSTSYG00000008928 ortholog_one2one 1 retrogene
retro_tsyr_232,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_600 85.45 63.93
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2. retro_btau_1317 93.46 100.00
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Download FASTA sequences of all ENSBTAG00000014239 retrocopies