Parental gene: | NFYC, ENSBTAG00000021943 |
| Aliases: | None |
| Description: | Nuclear transcription factor Y subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:Q5E9X1] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 3:106047151..106111674(-) |
>ENSBTAG00000021943
ATGTCCACAGAAGGAGGGTTTGGTGGTGCCGGCAGCAGCGACGCCCAGCAGAGCCTGCAGTCCTTCTGGCCTCGCGTCAT
GGAAGAAATCCGGAATTTAACAGTGAAAGATTTCCGAGTACAGGAACTCCCACTGGCTCGTATTAAGAAGATTATGAAAC
TGGATGAAGATGTGAAGATGATCAGTGCAGAAGCCCCTGTGTTGTTTGCCAAGGCAGCCCAGATTTTTATCACAGAGTTG
ACTCTTCGAGCCTGGATCCACACAGAGGATAACAAGCGCCGGACTCTTCAGAGAAATGATATCGCCATGGCAATTACAAA
ATTTGATCAGTTTGACTTTCTCATCGATATCGTTCCAAGAGATGAGCTGAAACCACCGAAGCGTCAGGAGGAGGTGCGCC
AGTCCGTGACTCCTGCCGAGCCCGTCCAGTACTACTTCACGCTGGCTCAGCAGCCTACTGCCGTCCAAGTCCAGGGGCAG
CAGCAAGGCCAGCAGACCACCAGCTCCACGACCACCATCCAGCCTGGGCAGATCATCATCGCACAGCCTCAGCAGGGCCA
GACCACACCTGTAACCATGCAAGTTGGAGAAGGTCAGCAGGTGCAGATTGTCCAGGCCCAGCCACAAGGTCAAGCCCAGC
AGGCCCAGAGTGGCACTGGACAGACCATGCAGGTGATGCAGCAGATCATCACGAACACAGGAGAGATCCAGCAGATCCCG
GTGCAGCTGAATGCCGGCCAACTGCAGTATATCCGCTTAGCCCAGCCTGTATCAGGCACCCAAGTCGTACAGGGACAGAT
CCAGACGCTTGCCACCAATGCTCAACAGATCACACAGACAGAGGTCCAGCAAGGACAGCAGCAGTTCAGCCAGTTCACGG
ATGGACAGCTCTACCAGATCCAGCAAGTCACCATGCCTGCTGGCCAGGACCTCGCCCAGCCCATGTTCATCCAGTCAGCC
AACCAGCCCTCCGACGGGCAGGCCCCCCAGGTGACCGGCGACTGA
ATGTCCACAGAAGGAGGGTTTGGTGGTGCCGGCAGCAGCGACGCCCAGCAGAGCCTGCAGTCCTTCTGGCCTCGCGTCAT
GGAAGAAATCCGGAATTTAACAGTGAAAGATTTCCGAGTACAGGAACTCCCACTGGCTCGTATTAAGAAGATTATGAAAC
TGGATGAAGATGTGAAGATGATCAGTGCAGAAGCCCCTGTGTTGTTTGCCAAGGCAGCCCAGATTTTTATCACAGAGTTG
ACTCTTCGAGCCTGGATCCACACAGAGGATAACAAGCGCCGGACTCTTCAGAGAAATGATATCGCCATGGCAATTACAAA
ATTTGATCAGTTTGACTTTCTCATCGATATCGTTCCAAGAGATGAGCTGAAACCACCGAAGCGTCAGGAGGAGGTGCGCC
AGTCCGTGACTCCTGCCGAGCCCGTCCAGTACTACTTCACGCTGGCTCAGCAGCCTACTGCCGTCCAAGTCCAGGGGCAG
CAGCAAGGCCAGCAGACCACCAGCTCCACGACCACCATCCAGCCTGGGCAGATCATCATCGCACAGCCTCAGCAGGGCCA
GACCACACCTGTAACCATGCAAGTTGGAGAAGGTCAGCAGGTGCAGATTGTCCAGGCCCAGCCACAAGGTCAAGCCCAGC
AGGCCCAGAGTGGCACTGGACAGACCATGCAGGTGATGCAGCAGATCATCACGAACACAGGAGAGATCCAGCAGATCCCG
GTGCAGCTGAATGCCGGCCAACTGCAGTATATCCGCTTAGCCCAGCCTGTATCAGGCACCCAAGTCGTACAGGGACAGAT
CCAGACGCTTGCCACCAATGCTCAACAGATCACACAGACAGAGGTCCAGCAAGGACAGCAGCAGTTCAGCCAGTTCACGG
ATGGACAGCTCTACCAGATCCAGCAAGTCACCATGCCTGCTGGCCAGGACCTCGCCCAGCCCATGTTCATCCAGTCAGCC
AACCAGCCCTCCGACGGGCAGGCCCCCCAGGTGACCGGCGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 17 .81 RPM |
| SRP017611_kidney | 50 .68 RPM |
| SRP017611_liver | 16 .31 RPM |
| ERP005899_muscle | 22 .75 RPM |
| ERP005899_liver | 11 .75 RPM |
| SRP030211_testis | 36 .95 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000012591 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000002987 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000066136 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000007360 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000004480 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000014970 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000032897 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012614 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000001483 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000000596 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1338 | 75.77 | 67.66 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000021943 retrocopies