Parental gene: | NFYC, ENSG00000066136 |
| Aliases: | NFYC, CBF-C, CBFC, H1TF2A, HAP5, HSM, NF-YC |
| Description: | nuclear transcription factor Y, gamma [Source:HGNC Symbol;Acc:7806] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 1:41157319..41237275(+) |
>ENSG00000066136
ATGTCCACAGAAGGAGGATTTGGTGGTACTAGCAGCAGTGATGCCCAGCAAAGCCTACAGTCGTTCTGGCCTCGGGTCAT
GGAAGAAATCCGGAATTTAACAGTGAAAGACTTCCGAGTGCAGGAACTCCCACTGGCTCGTATTAAGAAGATTATGAAAC
TGGATGAAGATGTGAAGATGATCAGTGCAGAAGCGCCTGTACTCTTTGCCAAGGCAGCCCAGATTTTTATCACAGAGTTG
ACTCTTCGAGCCTGGATTCACACAGAAGATAACAAGCGCCGGACTCTACAGAGAAATGATATCGCCATGGCAATTACAAA
ATTTGATCAGTTTGATTTTCTCATCGATATTGTTCCAAGAGATGAACTGAAACCTCCAAAGCGTCAGGAGGAGGTGCGCC
AGTCTGTAACTCCTGCCGAGCCAGTCCAGTACTATTTCACGCTGGCTCAGCAACCCACCGCTGTCCAAGTCCAGGGCCAG
CAGCAAGGCCAGCAGACCACCAGCTCCACGACCACCATCCAGCCTGGGCAGATCATCATCGCACAGCCTCAGCAGGGCCA
GACCACACCTGTGACAATGCAGGTTGGAGAAGGTCAGCAGGTGCAGATTGTCCAGGCTCAGCCACAGGGTCAAGCCCAAC
AGGCCCAGAGTGGCACTGGACAGACCATGCAGGTGATGCAGCAGATCATCACTAACACAGGAGAGATCCAGCAGATCCCG
GTGCAGCTGAATGCCGGCCAGCTGCAGTATATCCGCTTAGCCCAGCCTGTATCAGGCACTCAAGTTGTGCAGGGACAGAT
CCAGACACTTGCCACCAATGCTCAACAGGGGCAAAGAAATGCAAGTCAGGGGAAGCCTCGAAGGTGCCTGAAAGAAACCT
TACAGATTACACAGACAGAGGTCCAGCAAGGACAGCAGCAGTTCAGCCAGTTCACAGATGGACAGCAGCTCTACCAGATC
CAGCAAGTCACCATGCCTGCGGGCCAGGACCTCGCCCAGCCCATGTTCATCCAGTCAGCCAACCAGCCCTCCGACGGGCA
GGCCCCCCAGGTGACCGGCGACTGA
ATGTCCACAGAAGGAGGATTTGGTGGTACTAGCAGCAGTGATGCCCAGCAAAGCCTACAGTCGTTCTGGCCTCGGGTCAT
GGAAGAAATCCGGAATTTAACAGTGAAAGACTTCCGAGTGCAGGAACTCCCACTGGCTCGTATTAAGAAGATTATGAAAC
TGGATGAAGATGTGAAGATGATCAGTGCAGAAGCGCCTGTACTCTTTGCCAAGGCAGCCCAGATTTTTATCACAGAGTTG
ACTCTTCGAGCCTGGATTCACACAGAAGATAACAAGCGCCGGACTCTACAGAGAAATGATATCGCCATGGCAATTACAAA
ATTTGATCAGTTTGATTTTCTCATCGATATTGTTCCAAGAGATGAACTGAAACCTCCAAAGCGTCAGGAGGAGGTGCGCC
AGTCTGTAACTCCTGCCGAGCCAGTCCAGTACTATTTCACGCTGGCTCAGCAACCCACCGCTGTCCAAGTCCAGGGCCAG
CAGCAAGGCCAGCAGACCACCAGCTCCACGACCACCATCCAGCCTGGGCAGATCATCATCGCACAGCCTCAGCAGGGCCA
GACCACACCTGTGACAATGCAGGTTGGAGAAGGTCAGCAGGTGCAGATTGTCCAGGCTCAGCCACAGGGTCAAGCCCAAC
AGGCCCAGAGTGGCACTGGACAGACCATGCAGGTGATGCAGCAGATCATCACTAACACAGGAGAGATCCAGCAGATCCCG
GTGCAGCTGAATGCCGGCCAGCTGCAGTATATCCGCTTAGCCCAGCCTGTATCAGGCACTCAAGTTGTGCAGGGACAGAT
CCAGACACTTGCCACCAATGCTCAACAGGGGCAAAGAAATGCAAGTCAGGGGAAGCCTCGAAGGTGCCTGAAAGAAACCT
TACAGATTACACAGACAGAGGTCCAGCAAGGACAGCAGCAGTTCAGCCAGTTCACAGATGGACAGCAGCTCTACCAGATC
CAGCAAGTCACCATGCCTGCGGGCCAGGACCTCGCCCAGCCCATGTTCATCCAGTCAGCCAACCAGCCCTCCGACGGGCA
GGCCCCCCAGGTGACCGGCGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 22 .12 RPM |
| bodymap2_lung | 23 .08 RPM |
| bodymap2_breast | 32 .02 RPM |
| bodymap2_adipose | 31 .29 RPM |
| bodymap2_adrenal | 49 .00 RPM |
| bodymap2_skeletal_muscle | 57 .38 RPM |
| bodymap2_thyroid | 49 .53 RPM |
| bodymap2_prostate | 52 .50 RPM |
| bodymap2_colon | 28 .19 RPM |
| bodymap2_testis | 43 .29 RPM |
| bodymap2_brain | 23 .63 RPM |
| bodymap2_heart | 28 .39 RPM |
| bodymap2_white_blood_cells | 54 .42 RPM |
| bodymap2_lymph_node | 40 .02 RPM |
| bodymap2_ovary | 44 .61 RPM |
| bodymap2_kidney | 40 .43 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000012591 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000021943 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000002987 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000115350 | within_species_paralog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000007360 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000004480 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000014970 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000032897 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012614 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000001483 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000000596 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_4280 | 85.76 | 99.70 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_4668 | 73.11 | 98.21 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000066136 retrocopies