Parental gene:

PSMB2, ENSCAFG00000003543

Aliases:None
Description:proteasome (prosome, macropain) subunit, beta type, 2 [Source:HGNC Symbol;Acc:9539]
Organism:Dog (Canis familiaris)
Coordinates:15:6511388..6545080(+)


>ENSCAFG00000003543
ATGGAGTACCTCATCGGCATCCAGGGCCCCGACTACGTCCTCGTCGCCTCCGACCAGGTGGCCGCCAGCAGTATTGTCCA
GATGAAGGACGATCATGACAAGATGTTTAAGATGAGTGAAAAAATCTTACTCCTATGTGTTGGAGAGGCTGGAGACACTG
TACAGTTTGCAGAATATATTCAGAAAAATGTGCAACTTTATAAGATGCGAAATGGTTACGAATTGTCTCCCACAGCAGCA
GCTAATTTCACGCGCCGAAACTTGGCTGACTGTCTTCGGAGTCGGACCCCGTATCATGTCAACCTCCTCCTGGCTGGCTA
CGATGAGCATGAGGGTCCAGCGCTCTACTACATGGACTACTTGGCAGCCTTGGCCAAGGCCCCTTTTGCAGCCCATGGCT
ATGGTGCTTTCCTGACTCTCAGTATCCTGGACCGATACTACACACCAACCATCTCTCGGGAGAGGGCCGTGGAGCTCCTT
AGGAAATGTCTGGAGGAGCTCCAGAAACGCTTCATCCTGAACCTGCCAACCTTCAGTGTTCGAATCATTGACAAAAATGG
CATCCATGACCTGGACAACATTTCCTTCCCTAAACAGGGCTCCTAA

Library Parental gene expression (RPM)
SRP017611_brain 27 .47 RPM
SRP017611_kidney 54 .94 RPM
SRP017611_liver 20 .23 RPM
SRP012049_cerebellum 61 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000715 ortholog_one2one 1 retrogene
retro_amel_743,
Callithrix jacchus ENSCJAG00000001547 ortholog_one2one 1 retrogene
retro_cjac_2110,
Dasypus novemcinctus ENSDNOG00000017663 ortholog_one2one 1 retrogene
retro_dnov_159,
Equus caballus ENSECAG00000021615 ortholog_one2one 1 retrogene
retro_ecab_769,
Echinops telfairi ENSETEG00000019511 ortholog_one2one 1 retrogene
retro_etel_1529,
Felis catus ENSFCAG00000030845 ortholog_one2one 1 retrogene
retro_fcat_1803,
Macropus eugenii ENSMEUG00000000421 ortholog_one2one 1 retrogene
retro_meug_1235,
Monodelphis domestica ENSMODG00000017902 ortholog_one2many 1 retrogene
retro_mdom_79,
Mustela putorius furo ENSMPUG00000014891 ortholog_one2one 1 retrogene
retro_mputfur_1550,
Ochotona princeps ENSOPRG00000012259 ortholog_one2one 2 retrogenes
retro_opri_76, retro_opri_762,
Pteropus vampyrus ENSPVAG00000001871 ortholog_one2one 1 retrogene
retro_pvam_909,
Sorex araneus ENSSARG00000000409 ortholog_one2one 2 retrogenes
retro_sara_557, retro_sara_660,
Sarcophilus harrisii ENSSHAG00000016996 ortholog_one2one 1 retrogene
retro_shar_794,
Tupaia belangeri ENSTBEG00000005230 ortholog_one2one 1 retrogene
retro_tbel_4039,
Tarsius syrichta ENSTSYG00000005648 ortholog_one2one 2 retrogenes
retro_tsyr_403, retro_tsyr_912,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1291 75.44 55.72
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCAFG00000003543 retrocopies