Parental gene:

PSMB2, ENSECAG00000021615

Aliases:None
Description:proteasome (prosome, macropain) subunit, beta type, 2 [Source:HGNC Symbol;Acc:9539]
Organism:Horse (Equus caballus)
Coordinates:2:21670148..21700297(+)


>ENSECAG00000021615
ATGGAGTACCTTATCGGCATCCAGGGCCCCGACTATGTCCTTGTCGCCTCCGACCGGGTGGCCGCTAGCAATATTGTCCA
GATGAAGGACGATCATGACAAGATGTTTAAGATGAGTGAAAAAATCTTACTCCTATGTGTTGGAGAGGCTGGCGACACTG
TACAGTTTGCAGAATATATTCAGAAAAATGTGCAACTTTACAAGATGCGAAATGGTTATGAATTGTCTCCCACAGCAGCA
GCTAATTTCACACGCCGAAACCTGGCTGACTGTCTCCGGAGTCGGACTCCATATCATGTCAACCTCCTCCTGGCTGGCTA
CGATGAGCATGAGGGTCCAGCTCTCTACTACATGGACTACCTGGCCGCCTTGGCCAAGGCCCCTTTCGCAGCCCATGGCT
ATGGTGCCTTCCTGACTCTCAGTATCCTGGACCGATACTACACACCAACTATCTCACGTGAGAGGGCAGTGGAGCTTCTT
AGGAAATGTCTAGAGGAGCTCCAGAAACGCTTCATCCTGAATCTGCCAGCCTTCAGTGTTCGAATCATTGACAAAAATGG
CATTCACGAGCTGGACAACATTTCTTTTCCTAAACATGGCTCCTAA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 18 .18 RPM
SRP021940_cerebellum 26 .02 RPM
SRP021940_embryo 44 .47 RPM
SRP021940_placental_villous 37 .86 RPM
SRP021940_synovial_membrane 25 .23 RPM
SRP021940_testis 102 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000715 ortholog_one2one 1 retrogene
retro_amel_743,
Canis familiaris ENSCAFG00000003543 ortholog_one2one 1 retrogene
retro_cfam_1291,
Callithrix jacchus ENSCJAG00000001547 ortholog_one2one 1 retrogene
retro_cjac_2110,
Dasypus novemcinctus ENSDNOG00000017663 ortholog_one2one 1 retrogene
retro_dnov_159,
Echinops telfairi ENSETEG00000019511 ortholog_one2one 1 retrogene
retro_etel_1529,
Felis catus ENSFCAG00000030845 ortholog_one2one 1 retrogene
retro_fcat_1803,
Macropus eugenii ENSMEUG00000000421 ortholog_one2one 1 retrogene
retro_meug_1235,
Monodelphis domestica ENSMODG00000017902 ortholog_one2many 1 retrogene
retro_mdom_79,
Mustela putorius furo ENSMPUG00000014891 ortholog_one2one 1 retrogene
retro_mputfur_1550,
Ochotona princeps ENSOPRG00000012259 ortholog_one2one 2 retrogenes
retro_opri_76, retro_opri_762,
Pteropus vampyrus ENSPVAG00000001871 ortholog_one2one 1 retrogene
retro_pvam_909,
Sorex araneus ENSSARG00000000409 ortholog_one2one 2 retrogenes
retro_sara_557, retro_sara_660,
Sarcophilus harrisii ENSSHAG00000016996 ortholog_one2one 1 retrogene
retro_shar_794,
Tupaia belangeri ENSTBEG00000005230 ortholog_one2one 1 retrogene
retro_tbel_4039,
Tarsius syrichta ENSTSYG00000005648 ortholog_one2one 2 retrogenes
retro_tsyr_403, retro_tsyr_912,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_769 92.12 100.00
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Download FASTA sequences of all ENSECAG00000021615 retrocopies