Parental gene:

SNRPA, ENSCAFG00000005091

Aliases:None
Description:small nuclear ribonucleoprotein polypeptide A [Source:HGNC Symbol;Acc:11151]
Organism:Dog (Canis familiaris)
Coordinates:1:113018957..113025838(-)


>ENSCAFG00000005091
ATGAGGGGCCAGGCATTTGTCATCTTCAAGGAGGTCAGCAGCGCCACCAATGCCCTGCGCTCCATGCAGGGTTTCCCCTT
CTATGACAAGCCTATGTATGCCAAGACTGACTCGGATATTATTGCCAAGATGAAGGGTACCTTCGTGGAGCGGGACCGCA
AGCGGGAGAAGAGGAAGCCCAAAAGCCAGGAGACCCCAGCAGCCAAGAAGGCTGTGCAGGGTGGGGCCGCCGCCCCTGTG
GTGGGGGCTGTCCAGGGCCCTGTCCCGGGTATGCCCCCAATGACTCAAGCCCCCCGCATCATGCATCACATGCCAGGCCA
GCCTCCCTACATGCCGCCTCCTGGCATGATCCCGCCTCCAGGCCTGGCACCTGGACAAATCCCACCAGGGGCTATGCCCC
CACAGCAGCTTATGCCGGGGCAGATGCCACCAGCCCAGCCTCTTTCAGAAAATCCACCAAATCACATCTTATTCCTCACC
AACCTGCCTGAGGAGACCAATGAGCTCATGCTGTCCATGCTTTTCAACCAGTAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 11 .72 RPM
SRP017611_brain 7 .54 RPM
SRP017611_kidney 4 .42 RPM
SRP017611_liver 2 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005520 within_species_paralog 4 retrogenes
retro_cfam_1097, retro_cfam_1661, retro_cfam_1689, retro_cfam_264,
Callithrix jacchus ENSCJAG00000014865 possible_ortholog 1 retrogene
retro_cjac_287,
Cavia porcellus ENSCPOG00000010875 ortholog_one2one 1 retrogene
retro_cpor_663,
Myotis lucifugus ENSMLUG00000000219 possible_ortholog 1 retrogene
retro_mluc_1517,
Monodelphis domestica ENSMODG00000007912 ortholog_one2one 1 retrogene
retro_mdom_447,
Mustela putorius furo ENSMPUG00000017681 ortholog_one2one 1 retrogene
retro_mputfur_593,
Mus musculus ENSMUSG00000061479 ortholog_one2many 6 retrogenes
retro_mmus_275, retro_mmus_3374, retro_mmus_469, retro_mmus_888, retro_mmus_889, retro_mmus_958,
Otolemur garnettii ENSOGAG00000002864 possible_ortholog 1 retrogene
retro_ogar_2046,
Pteropus vampyrus ENSPVAG00000001494 ortholog_one2one 1 retrogene
retro_pvam_832,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1114 91.76 100.00
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Download FASTA sequences of all ENSCAFG00000005091 retrocopies