Parental gene:

SNRPA, ENSCPOG00000010875

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_157:701063..712201(+)


>ENSCPOG00000010875
CCTCCTTTAAGCCGTACCATGGCAGTTCCTGAGACCCGCCCCAATCACACTATTTATATCAACAACCTCAATGAGAAGAT
CAAGAAAGATGAGCTGAAGAAGTCCCTGTATGCCATCTTCTCCCAGTTTGGCCAGATCCTGGATATCCTGGTGTCACGGA
GCCTGAAGATGAGGGGCCAGGCCTTTGTCATCTTCAAGGAAGTCAGCAGTGCCACCAACGCCCTGCGCTCCATGCAGGGT
TTCCCCTTTTATGACAAGCCCATGCGCATCCAGTATGCCAAGACTGACTCAGATATCATTGCCAAGATGAAGGGTACGTT
TGTGGAGCGGGACCGCAAGCGGGAGAAGAGGAAGCCCAAGAGTCAGGAGACGCCATCTGCCAAGAAGGCTGTGCAGGGTG
GGGCGGCAGCCCCTGTGGTGGGAGCTGTCCAGGGCCCTGTTCCGGGCATGCCACCAATGACTCAGGCTCCTCGCATCATG
CACCACATGCCCGGCCAGCCGCCCTACATGCCACCTCCTGGCATGATCCCACCTCCAGGCCTTGCACCAGGCCAGATTCC
TCCTGGGGCCATGCCTCCGCAGCAGCTTATGCCGGGGCAGATGCCACCTGCCCAGCCTCTCTCCGAAAATCCACCAAATC
ACATCCTGTTCCTTACCAACCTGCCAGAGGAGACCAACGAGCTCATGTTGTCTATGCTTTTCAACCAGTTCCCTGGCTTC
AAGGAGGTCCGCCTGGTGCCTGGGCGGCACGATATTGCCTTCGTGGAGTTTGACAATGAGGTGCAGGCAGGGGCTGCTCG
CGATGCCCTGCAGGGCTTTAAGATCACCCAGAACAACGCCATGAAGATCTCCTTTGCTAAGAAGTAG

Library Parental gene expression (RPM)
SRP017611_brain 16 .05 RPM
SRP017611_kidney 15 .60 RPM
SRP017611_liver 8 .44 RPM
SRP040447_lung 22 .37 RPM
SRP040447_skeletal_muscle 11 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005091 ortholog_one2one 1 retrogene
retro_cfam_1114,
Callithrix jacchus ENSCJAG00000014865 possible_ortholog 1 retrogene
retro_cjac_287,
Myotis lucifugus ENSMLUG00000000219 possible_ortholog 1 retrogene
retro_mluc_1517,
Monodelphis domestica ENSMODG00000007912 ortholog_one2one 1 retrogene
retro_mdom_447,
Mustela putorius furo ENSMPUG00000017681 ortholog_one2one 1 retrogene
retro_mputfur_593,
Mus musculus ENSMUSG00000061479 ortholog_one2many 6 retrogenes
retro_mmus_275, retro_mmus_3374, retro_mmus_469, retro_mmus_888, retro_mmus_889, retro_mmus_958,
Otolemur garnettii ENSOGAG00000002864 possible_ortholog 1 retrogene
retro_ogar_2046,
Pteropus vampyrus ENSPVAG00000001494 ortholog_one2one 1 retrogene
retro_pvam_832,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_663 69.14 59.38
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Download FASTA sequences of all ENSCPOG00000010875 retrocopies