Parental gene:

SNRPA, ENSCJAG00000014865

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:22:34167272..34181947(+)


>ENSCJAG00000014865
CCCGAGACCCGCCCTAACCACACTATTTATATCAACAACCCTCAATGCAAAATCAGCACTGCAGAGCTAAAGAAGTCCCT
GTACGCCATCTTCTCCCAGTTTGGGCAGATCCTGGATATCCTGGTGTCACGGAGCCTGAAGATGAGGGGCCAGGCCTTTG
TCATCTTCAAGGAGGTCAGCAGTGCCACCAACGCCCTGCGCTCCATGCAGGGCTTCCCCTTCTATGACAAGCCCATGCGT
ATCCAGTATGCCAAGACCGACTCAGATATCATTGCCAAGATGAAAGGCACCTTTGTGGAGCGGGATCGCAAGCGGGAGAA
GAGAAAGCCCAAGAGCCAGGAGACACCAGCTGCCAAGAAGGCTGTGCAGGGCGGGGCAGCTGCCCCCGTGGTGGGAGCTG
TGCAGGGGCCTGTCCCGCCTGCCCCACAGCTTTCCGAGAATCCACCGAATCACATCTTGTTCCTCACCAACCTGCCAGAG
GAGACCAACGAGCTCATGCTGTCCATGCTTTTCAATCAATTCCCTGGCTTCAAGGAGGTCCGTCTGGTCCCCGGGCGGCA
TGACATCGCCTTCGTGGAGTTCGACAATGAGGTACAGGCAGGGGCAGCTCGCGATGCCCTGCAGGGCTTTAAGATCACCC
AGAACAACGCCATGAAGATCTCCTTTGCCAAGAAGTAG

Library Parental gene expression (RPM)
SRP051959_spleen 3 .19 RPM
SRP051959_skeletal_muscle 1 .46 RPM
SRP051959_lymph_node 4 .04 RPM
SRP051959_lung 2 .91 RPM
SRP051959_liver 3 .57 RPM
SRP051959_kidney 2 .46 RPM
SRP051959_heart 2 .25 RPM
SRP051959_colon 2 .26 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005091 possible_ortholog 1 retrogene
retro_cfam_1114,
Callithrix jacchus ENSCJAG00000004811 within_species_paralog 1 retrogene
retro_cjac_269,
Cavia porcellus ENSCPOG00000010875 possible_ortholog 1 retrogene
retro_cpor_663,
Myotis lucifugus ENSMLUG00000000219 ortholog_one2many 1 retrogene
retro_mluc_1517,
Monodelphis domestica ENSMODG00000007912 ortholog_one2many 1 retrogene
retro_mdom_447,
Mustela putorius furo ENSMPUG00000017681 possible_ortholog 1 retrogene
retro_mputfur_593,
Mus musculus ENSMUSG00000061479 possible_ortholog 6 retrogenes
retro_mmus_275, retro_mmus_3374, retro_mmus_469, retro_mmus_888, retro_mmus_889, retro_mmus_958,
Otolemur garnettii ENSOGAG00000002864 ortholog_one2many 1 retrogene
retro_ogar_2046,
Pteropus vampyrus ENSPVAG00000001494 possible_ortholog 1 retrogene
retro_pvam_832,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_287 89.86 65.78
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Download FASTA sequences of all ENSCJAG00000014865 retrocopies