Parental gene:

UQCRC2, ENSCAFG00000017756

Aliases:None
Description:ubiquinol-cytochrome c reductase core protein II [Source:HGNC Symbol;Acc:12586]
Organism:Dog (Canis familiaris)
Coordinates:6:23631896..23653837(-)


>ENSCAFG00000017756
ATGAAGCTGCTGAGGAGAGCCGGGTCCCTCTCGAGATTTTATTCCCTGAAAGTTGCTCCCAAAGTGAAAGCCACAGCTGC
CCCTGCAGGAGTGCCTTTACATCCTCAGGACCTTGAGTTTACCAAATTACCAAATGGCTTAGTGATTGCTTCTCTGGAAA
ACTATGCTCCTGCATCAAGAATTGGTTTGTTTATTAAAGCAGGCAGTAGATATGAGGACTCCAACCACTTAGGAACCTCT
CATTTGCTTCGTCTTGCATCCAGTTTGACTACAAAAGGAGCTTCATCTTTCAAGATAACCCGTGGAATTGAAGCAGTTGG
TGGTAAATTAAGTGTGACTTCAACCAGGGAAAATATGGCCTACACTGTGGAATGCCTGCGGGATGATGTTGATATTCTAA
TGGAGTTCCTGCTCAATGTCACCACATCACCAGAATTTCGTCGTTGGGAAGTGGCTGCCCTTCAGTCTCAGCTAAGGATT
GACAAAGCTGTGGCTTTTCAGAACCCACAGGCTCATGTCCTTGAAAATTTGCATGCTGCAGCTTACCGAAATGCCTTGGC
TAATTCCCTGTACTGTCCTGACTACAGGATTGGAAAAGTGACACCAGATGAGTTGCATTACTATGTTCAGAACCATTTCA
CAAGTGCAAGAATGGCTTTGATTGGACTTGGTGTGGGTCACCCTGTTCTAAAGCAAGTTGCGGAACAGTTTCTCAACATG
AGGGGCGGGCTTGGTTTACCTGGTGCAAAGGCCAGATACCGTGGAGGTGAAATCCGAGAGCAGAATGGAGACAGTCTTGT
TCATGCGGCTCTTGTAGCAGAAGGTGCTGCCATAGGAAGTACAGAAGCAAATGCATTTAGTGTTCTCCAGTATGTCCTTG
GTGCTGGACCACACGTCAAGAGGGGCAGCAATCCCACCAGTTCCCTATACCAGGCTGTTGCCAAGGGAGTTCACCAGCCA
TTTGATGTTTCTGCTTTTAACGCTAGTTACTCTGATTCCGGCCTCTTTGGGATTTACACTATCTCACAGGCTGCTGCAGC
TGGAGATGTTATCAAGGCTGCCTATAATCAAGTAAAAACAGTTGCTCAAGGAAACCTTTCCAGTGTAGATGTCCAGGTTG
CCAATTACCTGCAATCAACCATGGTCTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 62 .07 RPM
SRP017611_brain 82 .25 RPM
SRP017611_kidney 217 .46 RPM
SRP017611_liver 68 .89 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021651 ortholog_one2one 2 retrogenes
retro_btau_1008, retro_btau_1668,
Callithrix jacchus ENSCJAG00000009116 ortholog_one2many 1 retrogene
retro_cjac_222,
Echinops telfairi ENSETEG00000001084 ortholog_one2one 1 retrogene
retro_etel_2087,
Homo sapiens ENSG00000140740 ortholog_one2one 1 retrogene
retro_hsap_2785,
Gorilla gorilla ENSGGOG00000015379 ortholog_one2one 1 retrogene
retro_ggor_1941,
Myotis lucifugus ENSMLUG00000003345 possible_ortholog 2 retrogenes
retro_mluc_1391, retro_mluc_770,
Macaca mulatta ENSMMUG00000018287 ortholog_one2one 2 retrogenes
retro_mmul_1442, retro_mmul_683,
Monodelphis domestica ENSMODG00000007645 ortholog_one2one 1 retrogene
retro_mdom_327,
Mustela putorius furo ENSMPUG00000016849 ortholog_one2many 1 retrogene
retro_mputfur_1042,
Nomascus leucogenys ENSNLEG00000012185 ortholog_one2one 1 retrogene
retro_nleu_685,
Oryctolagus cuniculus ENSOCUG00000003891 ortholog_one2many 2 retrogenes
retro_ocun_604, retro_ocun_739,
Otolemur garnettii ENSOGAG00000005478 ortholog_one2many 4 retrogenes
retro_ogar_1113, retro_ogar_112, retro_ogar_1934, retro_ogar_82,
Ochotona princeps ENSOPRG00000000419 ortholog_one2one 1 retrogene
retro_opri_455,
Pongo abelii ENSPPYG00000007174 ortholog_one2one 1 retrogene
retro_pabe_2232,
Pan troglodytes ENSPTRG00000007871 ortholog_one2one 1 retrogene
retro_ptro_1886,
Sorex araneus ENSSARG00000010670 ortholog_one2one 1 retrogene
retro_sara_231,
Tupaia belangeri ENSTBEG00000010785 ortholog_one2one 1 retrogene
retro_tbel_3988,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_2075 96.30 56.28
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Download FASTA sequences of all ENSCAFG00000017756 retrocopies