Parental gene:

MMU.2129, ENSMMUG00000018287

Aliases:None
Description:cytochrome b-c1 complex subunit 2, mitochondrial [Source:RefSeq peptide;Acc:NP_001248062]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:20:20363349..20394613(+)


>ENSMMUG00000018287
ATGAAGCTACTAACCAGAGCCGGGTCCTTCTCGAGATTTTATTCCCTCAAAGTTGCCCCCAAAGTTAAAGCCACAGCTGC
GCCTGCAGGAGCACCGCCACAGCCTCAGGACCTTGAGTTTACCAAGTTACCAAATGGCTTGGTGATTGCTTCTTTGGAAA
ACTATGCTCCTCTATCAAGAATTGGTTTGTTCATTAAAGCAGGCAGTAGATATGAGGACTCCAACAATTTAGGAACCACC
CATTTGCTGAGACTTGCATCCAGTCTGACGACAAAAGGAGCTTCATCTTTCAAGATAACCCATGGAATTGAAGCAGTTGG
TGGCAAATTAAGTGTGACCGCAACAAGGGAAACCATGGCTTACACTGTGGAATGCCAGCGGGGTGATGTTGATATTCTAA
TGGAGTTCCTGCTCAATGTCACCACAGCACCAGAATTTCGTCGTTGGGAAGTAGCTGACCTTCAGCCTCAGCTAAAGATT
GACAAAGCTGTGGCCTTTCAGAATCCGCAGACTCATGTCATTGAAAATTTGCATGCAGCAGCTTACCGGAATGCCTTGGC
TAATCCCTTGTACTGTCCTGACTATAGGATTGGAAAAGTGACATCAGAGGAGTTACATTACTTTGTTCAGAACCATTTCA
CAAGTGCAAGAATGGCTTTGATTGGACTTGGTGTGAGTCATCCTGTTCTAAAGCAAGTTGCTGAACAGTTTCTCAACATG
AGGGGTGGGTTTGGTTTATCTGGTGTGAAGGCCAAATACCGTGGAGGTGAAATCCGAGAACAGAATGGAGACAGTCTTGT
CCATGCTGCTCTTGTAGCAGAGAGTGCTGTCGCGGGAAGTGCAGAGGCAAATGCGTTTAGTGTTCTTCAGCATGTCCTCG
GTGCTGGGCCACATGTCAAGAGGGGCAGCAACACCACCAGCCATCTGCACCAGGCTGTTGCCAAGGCGACTCAGCAGCCA
TTTGATGTTTCCGCATTTAATGCCAGTTACTCAGATTCTGGACTCTTCGGGATTTATACTATTTCCCAGGCCACAGCTGC
TGGAGATGTAATCAAGGCTGCATATAATCAAGTCAAAACAATAGCTCAAGGAAACCTTTCCAACACAGATGTCCAAGCTG
CCAAGAACAAGCTGAAAGCTGGATACCTAATGTCAGTGGAGTCTTCTGAACGTTTCCTGGAAGAAGTCGGGTCGCAGGCT
CTAGTTGCTGGTTCTTACGTGCCACCATCCACAGTCCTTCAGCAGATTGATTCAGTGGCTAACGCTGATATCATAAATGC
TGCAAAGAAGTTTGTTTCTGGCCAGAAGTCGATGGCAGCAAGTGGAAATTTGGGACATACACCTTTTGTTGATGAGCTGT
AA

Library Parental gene expression (RPM)
SRP007412_brain 166 .06 RPM
SRP007412_brain_prefrontal_cortex 139 .70 RPM
SRP007412_cerebellum 142 .32 RPM
SRP007412_heart 310 .33 RPM
SRP007412_kidney 222 .88 RPM
SRP007412_liver 120 .49 RPM
SRP007412_testis 85 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021651 ortholog_one2one 2 retrogenes
retro_btau_1008, retro_btau_1668,
Canis familiaris ENSCAFG00000017756 ortholog_one2one 1 retrogene
retro_cfam_2075,
Callithrix jacchus ENSCJAG00000009116 ortholog_one2many 1 retrogene
retro_cjac_222,
Echinops telfairi ENSETEG00000001084 ortholog_one2one 1 retrogene
retro_etel_2087,
Homo sapiens ENSG00000140740 ortholog_one2one 1 retrogene
retro_hsap_2785,
Gorilla gorilla ENSGGOG00000015379 ortholog_one2one 1 retrogene
retro_ggor_1941,
Myotis lucifugus ENSMLUG00000003345 ortholog_one2many 2 retrogenes
retro_mluc_1391, retro_mluc_770,
Monodelphis domestica ENSMODG00000007645 ortholog_one2one 1 retrogene
retro_mdom_327,
Mustela putorius furo ENSMPUG00000016849 ortholog_one2many 1 retrogene
retro_mputfur_1042,
Nomascus leucogenys ENSNLEG00000012185 ortholog_one2one 1 retrogene
retro_nleu_685,
Oryctolagus cuniculus ENSOCUG00000003891 ortholog_one2many 2 retrogenes
retro_ocun_604, retro_ocun_739,
Otolemur garnettii ENSOGAG00000005478 ortholog_one2many 4 retrogenes
retro_ogar_1113, retro_ogar_112, retro_ogar_1934, retro_ogar_82,
Ochotona princeps ENSOPRG00000000419 ortholog_one2one 1 retrogene
retro_opri_455,
Pongo abelii ENSPPYG00000007174 ortholog_one2one 1 retrogene
retro_pabe_2232,
Pan troglodytes ENSPTRG00000007871 ortholog_one2one 1 retrogene
retro_ptro_1886,
Sorex araneus ENSSARG00000010670 ortholog_one2one 1 retrogene
retro_sara_231,
Vicugna pacos ENSVPAG00000010914 ortholog_one2one 1 retrogene
retro_vpac_640,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_683 94.48 100.00
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2. retro_mmul_1442 64.17 78.59
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Download FASTA sequences of all ENSMMUG00000018287 retrocopies