Parental gene: | ENSOGAG00000005478 |
| Aliases: | None |
| Description: | None |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873615.1:233652..269354(+) |
>ENSOGAG00000005478
ATGAAGCTGCTAACCAGAGCCGGGTCCTTCTCGAGATTTTATTCCCTCAAAGTTGCCCCCAAAGTTAAAGCCACAGCTGC
CCCTGCAGGAGCACCTCCACATCCTCAGGACCTTGAGTTCACCAAATTACCGAATGGTTTAGTGATTGCTTCTTTGGAAA
ACTATGCTCCTGTATCAAGGATTGGTTTGTTCATTAAAGCAGGCAGTAGATATGAGGACTCGGACAATTTAGGAACTTCT
CATTTGCTGCGTCTTGCATCCAGTTTAACTACAAAAGGAGCTTCATCTTTCAAGATAACTCGTGGAATTGAAGCAGCTGG
TGGTAAATTAAGTGTGACTGCAACAAGGGAGAACATAGCTTACACTGTGGAATGCCTGAGGGGTGATGTTGATATTCTAA
TGGAGTTCCTGCTCAATGTCACCACAGCACCAGAATTTCGTCGTTGGGAAGTAGCTGACCTTCAGTCACAACTAAGGGTT
GACAAAGCAGTGGCTTTTCAGAATCCACAGGCTCAAGTCATTGAAAATCTGCATGCTGCAGCTTACCGGAATGCCTTGGC
TAATTCCTTGTATTGTCCTGACTATAGGATTGGAAAAGTGACAGCAGAGGAGTTACACTACTATGTTCAGAATCATTTTA
CAAGTGCAAGAATGGCTTTGGTTGGACTTGGTGTGAGTCATCCTGTTCTTAAGCAAATTGCTGAACAGTTTCTCAACATG
AGGGGAGGGCTTGGTTTAACTGGTGCCAAGGCCAGATACCGTGGGGGTGAAATTCGAGAACAGAATGGAAACAGTCTTGT
CCACGCTGCTCTTGTAGCAGAAGGTGCTGCCTCAGGAAGTGCAGAAGCAAATGCATTCAGTCTTCTTCAGCATGTGCTTG
GTGCTGGACCACATGTCAAGAGGGGCAGCAATACCACCAGCCTTCTATACCAGGCTGTTGCCAAGGGAGTTCACCAGCCA
TTTGATGTTTCTGCTTTTAATGCCAGTTACTCAGATTCTGGACTTTTCGGGATTTACACTATTTCCCAGGCTGCATCTGC
TGGAGATGTTATCAAGGCTGCCTATAACCAGATAAAAACAATTGCTCAAGGAAGCCTTTCCAAAGCAGATGTCCAAGCTG
CCAGAAACAAGCTGAAAGCTGGATATTTAATGTCTGTGGAGTCTTCTGAGGGTTTCCTGGATGAAGTTGGATCCCAGGCG
CTAGTTGCTGGCTCTTACATCCCACCATCCAGAGTCCTTCAGGAGATTGATTCAGTGGCTGATGATGATGTCATAAATGC
TGCAAAGAAGTTTGTTTCAGGCCAGAAGTCAATGGCAGCAAGTGGAAATTTGGGACATACACCTTTTGTTGATGAGTTTT
AA
ATGAAGCTGCTAACCAGAGCCGGGTCCTTCTCGAGATTTTATTCCCTCAAAGTTGCCCCCAAAGTTAAAGCCACAGCTGC
CCCTGCAGGAGCACCTCCACATCCTCAGGACCTTGAGTTCACCAAATTACCGAATGGTTTAGTGATTGCTTCTTTGGAAA
ACTATGCTCCTGTATCAAGGATTGGTTTGTTCATTAAAGCAGGCAGTAGATATGAGGACTCGGACAATTTAGGAACTTCT
CATTTGCTGCGTCTTGCATCCAGTTTAACTACAAAAGGAGCTTCATCTTTCAAGATAACTCGTGGAATTGAAGCAGCTGG
TGGTAAATTAAGTGTGACTGCAACAAGGGAGAACATAGCTTACACTGTGGAATGCCTGAGGGGTGATGTTGATATTCTAA
TGGAGTTCCTGCTCAATGTCACCACAGCACCAGAATTTCGTCGTTGGGAAGTAGCTGACCTTCAGTCACAACTAAGGGTT
GACAAAGCAGTGGCTTTTCAGAATCCACAGGCTCAAGTCATTGAAAATCTGCATGCTGCAGCTTACCGGAATGCCTTGGC
TAATTCCTTGTATTGTCCTGACTATAGGATTGGAAAAGTGACAGCAGAGGAGTTACACTACTATGTTCAGAATCATTTTA
CAAGTGCAAGAATGGCTTTGGTTGGACTTGGTGTGAGTCATCCTGTTCTTAAGCAAATTGCTGAACAGTTTCTCAACATG
AGGGGAGGGCTTGGTTTAACTGGTGCCAAGGCCAGATACCGTGGGGGTGAAATTCGAGAACAGAATGGAAACAGTCTTGT
CCACGCTGCTCTTGTAGCAGAAGGTGCTGCCTCAGGAAGTGCAGAAGCAAATGCATTCAGTCTTCTTCAGCATGTGCTTG
GTGCTGGACCACATGTCAAGAGGGGCAGCAATACCACCAGCCTTCTATACCAGGCTGTTGCCAAGGGAGTTCACCAGCCA
TTTGATGTTTCTGCTTTTAATGCCAGTTACTCAGATTCTGGACTTTTCGGGATTTACACTATTTCCCAGGCTGCATCTGC
TGGAGATGTTATCAAGGCTGCCTATAACCAGATAAAAACAATTGCTCAAGGAAGCCTTTCCAAAGCAGATGTCCAAGCTG
CCAGAAACAAGCTGAAAGCTGGATATTTAATGTCTGTGGAGTCTTCTGAGGGTTTCCTGGATGAAGTTGGATCCCAGGCG
CTAGTTGCTGGCTCTTACATCCCACCATCCAGAGTCCTTCAGGAGATTGATTCAGTGGCTGATGATGATGTCATAAATGC
TGCAAAGAAGTTTGTTTCAGGCCAGAAGTCAATGGCAGCAAGTGGAAATTTGGGACATACACCTTTTGTTGATGAGTTTT
AA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000021651 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000017756 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000009116 | ortholog_many2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000001084 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000140740 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015379 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000003345 | ortholog_many2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000018287 | ortholog_one2many | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000007645 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000016849 | ortholog_many2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012185 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000003891 | ortholog_many2many | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000000419 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007174 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007871 | ortholog_one2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000010670 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000010785 | possible_ortholog | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000010914 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_82 | 94.92 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ogar_112 | 93.82 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ogar_1113 | 93.85 | 79.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ogar_1934 | 82.12 | 66.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000005478 retrocopies