Parental gene:

cfa-mir-147, ENSCAFG00000031501

Aliases:None
Description:cfa-mir-147 [Source:miRBase;Acc:MI0010371]
Organism:Dog (Canis familiaris)
Coordinates:30:11795851..11802453(+)


>ENSCAFG00000031501
ATGAACTTTTTCCAACTCCTGATGAAAAAGAAGGAACTTATTCCTTTGGTGCTGTTCATGGCCACAGCGGCGGGCGGAGC
TTCGTCTTTTGCTGTATATTCCCTTCAAAAATCTGATGTGATCCTTGATCGGAAAAGAAATCCAGAACCTTGGGAAACCG
TGGACCCTAGTGTACCTAGCAAGCTTATAACAATCAACCAAGAATGGAAGCCCATTGAAGAGTTGCAGAAGGTCCGAAGA
GCCACTAAATGA

Library Parental gene expression (RPM)
SRP017611_brain 0 .16 RPM
SRP017611_kidney 10 .63 RPM
SRP017611_liver 0 .00 RPM
SRP012049_cerebellum 0 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000020706 ortholog_one2one 1 retrogene
retro_cpor_450,
Erinaceus europaeus ENSEEUG00000003556 ortholog_one2one 1 retrogene
retro_eeur_594,
Macropus eugenii ENSMEUG00000013137 ortholog_one2one 4 retrogenes
retro_meug_1593, retro_meug_2033, retro_meug_278, retro_meug_63,
Monodelphis domestica ENSMODG00000028279 ortholog_one2many 1 retrogene
retro_mdom_225,
Oryctolagus cuniculus ENSOCUG00000029216 ortholog_one2many 1 retrogene
retro_ocun_33,
Rattus norvegicus ENSRNOG00000050251 ortholog_one2one 1 retrogene
retro_rnor_484,
Sarcophilus harrisii ENSSHAG00000006433 ortholog_one2many 3 retrogenes
retro_shar_296, retro_shar_416, retro_shar_744,
Ictidomys tridecemlineatus ENSSTOG00000021929 ortholog_one2one 1 retrogene
retro_itri_1133,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_669 86.75 100.00
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2. retro_cfam_1654 95.18 100.00
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Download FASTA sequences of all ENSCAFG00000031501 retrocopies