Parental gene:

C15ORF48, ENSCPOG00000020706

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_23:20633654..20636265(+)


>ENSCPOG00000020706
ATGGGTGTTTTTCAAACCTTGATGAAGAAGAAAGAGCTCATCCCTCTGGCGGTGATCATGACCGTGGCGGCCAGTGGAGC
CTTGTCCTTCGCCCTGTACTCCTTTCGGAAGACTGACGTGATTGTTGATCGAAGAAGGAACCCAGAGCCTTGGGAAACTG
TGGACCCTCATGTACCTCAAAAGCTCATAACCATCAACCAACAGTGGAAGCCAATTGAAGAGTTGCAGACGGTCCGGAGT
GCAACCAAA

Library Parental gene expression (RPM)
SRP017611_brain 1 .21 RPM
SRP017611_kidney 2 .30 RPM
SRP017611_liver 0 .61 RPM
SRP040447_lung 20 .05 RPM
SRP040447_skeletal_muscle 2 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000031501 ortholog_one2one 2 retrogenes
retro_cfam_1654, retro_cfam_669,
Erinaceus europaeus ENSEEUG00000003556 ortholog_one2one 1 retrogene
retro_eeur_594,
Macropus eugenii ENSMEUG00000013137 ortholog_one2one 4 retrogenes
retro_meug_1593, retro_meug_2033, retro_meug_278, retro_meug_63,
Monodelphis domestica ENSMODG00000028279 ortholog_one2many 1 retrogene
retro_mdom_225,
Oryctolagus cuniculus ENSOCUG00000029216 ortholog_one2many 1 retrogene
retro_ocun_33,
Rattus norvegicus ENSRNOG00000050251 ortholog_one2one 1 retrogene
retro_rnor_484,
Sarcophilus harrisii ENSSHAG00000006433 ortholog_one2many 3 retrogenes
retro_shar_296, retro_shar_416, retro_shar_744,
Ictidomys tridecemlineatus ENSSTOG00000021929 ortholog_one2one 1 retrogene
retro_itri_1133,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_450 60.27 87.95
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Download FASTA sequences of all ENSCPOG00000020706 retrocopies