Parental gene: | RNPS1, ENSCHOG00000004866 |
| Aliases: | None |
| Description: | RNA binding protein S1, serine-rich domain [Source:HGNC Symbol;Acc:10080] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | scaffold_67819:5101..8962(+) |
>ENSCHOG00000004866
ATGGATTTATCAGGAGTGAAAAAGAAGAGCTTGCTAGGAGTCAAAGAAAATAATAAAAAGTCCAGCACTAGGGCTCCTTC
TCCTTCCAAACGCAAAGAACGCTCTGACGAGAAGTCCAAGGACCGCTCTAAAGACAAGGGGGCCACCAAGGACGAGAAGG
ATCGTGGCAGGGATAAAACCAGGAAGAGGCGCAGCGCCTCCAGCGGCAGCAGCAGCACCAGGTCTCGCTCCAGCTCTACC
TCCAGCTCCGGCTCCAGTACCAGCACGGGCTCAAGCAGTGGTTCCAGCTCCTCTTCGGCCTCTAGCCGCTCGGGAAGTTC
CAGCACATCCCGCAGCTCCAGCTCCAGCAGCTCCTCGGGCTCTCCAAGTCCTTCTCGGCGCAGACACGACAATAGGCGGC
GTTCCCGCTCCAAATCCAAGCCACCCAAAAGAGATGAAAAGGAAAGGAAAAGGCGGAGTCCTTCCCCAAAACCCACCAAA
GTACACATTGGCAGGCTCACCCGGAATGTGACCAAGGATCACATCATGGAGATATTTTCCACCTATGGGAAAATTAAAAT
GATTGACATGCCTGTGGAAAGGATGCACCCCCATCTTTCCAAAGGCTACGCGTATGTTGAGTTTGAGAACCCGGATGAAG
CCGAGAAGGCGCTGAAACACATGGACGGAGGACAAATAGATGGCCAGGAGATCACTGCCACAGCCGTGCTGGCCCCCTGG
CCTCGGCCACCCCCCCGGCGTTTCAGCCCTCCCAGGAGAATGCTGCCACCACCGCCCATGTGGCGCAGGTCCCCCCCACG
GATGAGGAGAAGGTCCCGCTCTCCCAGGCGCAGGTCTCCCGTGCGCCGGCGCTCCCGGTCCCCTGGCCGCCGCCGCCACC
GAAGCCGCTCCAGCTCCAACTCCTCCCGCTAA
ATGGATTTATCAGGAGTGAAAAAGAAGAGCTTGCTAGGAGTCAAAGAAAATAATAAAAAGTCCAGCACTAGGGCTCCTTC
TCCTTCCAAACGCAAAGAACGCTCTGACGAGAAGTCCAAGGACCGCTCTAAAGACAAGGGGGCCACCAAGGACGAGAAGG
ATCGTGGCAGGGATAAAACCAGGAAGAGGCGCAGCGCCTCCAGCGGCAGCAGCAGCACCAGGTCTCGCTCCAGCTCTACC
TCCAGCTCCGGCTCCAGTACCAGCACGGGCTCAAGCAGTGGTTCCAGCTCCTCTTCGGCCTCTAGCCGCTCGGGAAGTTC
CAGCACATCCCGCAGCTCCAGCTCCAGCAGCTCCTCGGGCTCTCCAAGTCCTTCTCGGCGCAGACACGACAATAGGCGGC
GTTCCCGCTCCAAATCCAAGCCACCCAAAAGAGATGAAAAGGAAAGGAAAAGGCGGAGTCCTTCCCCAAAACCCACCAAA
GTACACATTGGCAGGCTCACCCGGAATGTGACCAAGGATCACATCATGGAGATATTTTCCACCTATGGGAAAATTAAAAT
GATTGACATGCCTGTGGAAAGGATGCACCCCCATCTTTCCAAAGGCTACGCGTATGTTGAGTTTGAGAACCCGGATGAAG
CCGAGAAGGCGCTGAAACACATGGACGGAGGACAAATAGATGGCCAGGAGATCACTGCCACAGCCGTGCTGGCCCCCTGG
CCTCGGCCACCCCCCCGGCGTTTCAGCCCTCCCAGGAGAATGCTGCCACCACCGCCCATGTGGCGCAGGTCCCCCCCACG
GATGAGGAGAAGGTCCCGCTCTCCCAGGCGCAGGTCTCCCGTGCGCCGGCGCTCCCGGTCCCCTGGCCGCCGCCGCCACC
GAAGCCGCTCCAGCTCCAACTCCTCCCGCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000002066 | ortholog_one2one | 2 retrogenes | |
| Equus caballus | ENSECAG00000023288 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000014275 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000008882 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000015891 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000031582 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000031310 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000005105 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000008703 | ortholog_one2one | 4 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000016951 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000013200 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_493 | 62.58 | 52.15 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_1587 | 57.79 | 78.88 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_1985 | 71.57 | 65.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_2272 | 56.68 | 80.86 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000004866 retrocopies