Parental gene:

RNPS1, ENSPVAG00000005105

Aliases:None
Description:RNA binding protein S1, serine-rich domain [Source:HGNC Symbol;Acc:10080]
Organism:Megabat (Pteropus vampyrus)
Coordinates:GeneScaffold_2869:58923..63927(-)


>ENSPVAG00000005105
ATGGATTTATCAGGAGTGAAAAAGAAGAGCTTGCTAGGAGTCAAAGAAAATAATAAAAAGTCCAGCACTAGGGCTCCTTC
TCCTACCAAACGCAAAGACCGCTCTGATGAGAAGTCCAAGGATCGTTCTAAAGATAAAGGGGCCACCAAGGAGACAAGCG
AGAAGGATCGCGGCAGGGATAAAACTCGAAAGAGGCGCAGCGCTTCAAGCGGTAGCAGCAGCACCAGATCTCGGTCCAGC
TCTACCTCCAGCTCGGGCTCCAGCACCAGCACTGGCTCAAGCAGTGGCTCTAGCTCCTCATCAGCATCAAGCCGCTCAGG
GAGTTCCAGCACATCCCGCAGCTCCAGCTCCAGCAGCTCTTCTGGCTCTCCAAGTCCTTCTCGGCGCAGACATGACAACA
GGCGGCGTTCCCGCTCCAAATCCAAACCACCCAAAAGAGATGAAAAGGAAAGGAAGAGGCGGAGCCCTTCCCCTAAACCC
ACCAAAGTGCATATTGGGAGGCTCACCAGGAATGTGACCAAGGATCATATCATGGAGATATTCTCCACCTATGGGAAAAT
TAAAATGATTGACATGCCTGTAGAAAGGATGCATCCTCATCTGTCTAAAGGCTATGCATATGTGGAGTTTGAGAATCCAG
ATGAAGCTGAGAAGGCACTGAAGCACATGGATGGAGGGCAAATTGATGGCCAGGAAATCACTGCCACTGCTGTGCTGGCC
CCCTGGCCTAGGCCACCCCCTAGGCGATTCAGCCCTCCCAGGAGAATGCTGCCACCACCACCCATGTGGCGCCGGTCACC
CCCACGGATGAGGAGAAGGTCACGTTCTCCGAGGCGCAGGTCCCCTGTGCGCCGGCGGTCCCGATCTCCAGGCCGCCGCC
GCCACAGGAGCCGCTCTAGCTCCAATTCCTCTCGATAA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004866 ortholog_one2one 4 retrogenes
retro_chof_1587, retro_chof_1985, retro_chof_2272, retro_chof_493,
Cavia porcellus ENSCPOG00000002066 ortholog_one2one 2 retrogenes
retro_cpor_363, retro_cpor_953,
Equus caballus ENSECAG00000023288 ortholog_one2one 1 retrogene
retro_ecab_524,
Gorilla gorilla ENSGGOG00000014275 possible_ortholog 1 retrogene
retro_ggor_2016,
Macropus eugenii ENSMEUG00000008882 ortholog_one2one 1 retrogene
retro_meug_1996,
Monodelphis domestica ENSMODG00000015891 ortholog_one2one 1 retrogene
retro_mdom_1171,
Otolemur garnettii ENSOGAG00000031582 ortholog_one2one 1 retrogene
retro_ogar_3241,
Pan troglodytes ENSPTRG00000031310 ortholog_one2one 1 retrogene
retro_ptro_1967,
Rattus norvegicus ENSRNOG00000008703 ortholog_one2one 4 retrogenes
retro_rnor_1537, retro_rnor_2135, retro_rnor_2988, retro_rnor_649,
Sarcophilus harrisii ENSSHAG00000016951 ortholog_one2one 1 retrogene
retro_shar_390,
Ictidomys tridecemlineatus ENSSTOG00000013200 ortholog_one2one 1 retrogene
retro_itri_1160,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_296 75.61 52.13
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Download FASTA sequences of all ENSPVAG00000005105 retrocopies