Parental gene: | ENSCJAG00000001174 |
| Aliases: | None |
| Description: | Cytochrome c oxidase subunit 6A, mitochondrial [Source:UniProtKB/TrEMBL;Acc:F7I4Z3] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 9:111293486..111296114(+) |
>ENSCJAG00000001174
ATGGCGGCAGCTGTTGCGTCTCGCCTTTCTAGGCTGCTGGGTCGGTCCCGCCCACAGGTGGGGCGGCCTATGTCCAGTGC
CGCCCATAGCGGAGAAGGTTCAGCTCGCATGTGGAAGATCCTCACTTTCTTCGTCGCGCTCCCTGGGGTGGGAGTCAGCA
TGCTGAATGTGTACCTGAAGTCGCAAAAAGAGCACGAGAGACCCGAGTTCGTCGCCTACCCTCATCTCCGCATCAGGACC
AAGCCGTTTCCCTGGGGAGATGGTAACCATACCCTCTTCCATAACTCTCATGTGAATCCACTTCCAACTGGCTACGAAGA
TGAATAA
ATGGCGGCAGCTGTTGCGTCTCGCCTTTCTAGGCTGCTGGGTCGGTCCCGCCCACAGGTGGGGCGGCCTATGTCCAGTGC
CGCCCATAGCGGAGAAGGTTCAGCTCGCATGTGGAAGATCCTCACTTTCTTCGTCGCGCTCCCTGGGGTGGGAGTCAGCA
TGCTGAATGTGTACCTGAAGTCGCAAAAAGAGCACGAGAGACCCGAGTTCGTCGCCTACCCTCATCTCCGCATCAGGACC
AAGCCGTTTCCCTGGGGAGATGGTAACCATACCCTCTTCCATAACTCTCATGTGAATCCACTTCCAACTGGCTACGAAGA
TGAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 28 .28 RPM |
| SRP051959_skeletal_muscle | 6 .33 RPM |
| SRP051959_lymph_node | 20 .96 RPM |
| SRP051959_lung | 23 .51 RPM |
| SRP051959_liver | 59 .59 RPM |
| SRP051959_kidney | 54 .80 RPM |
| SRP051959_heart | 14 .28 RPM |
| SRP051959_colon | 34 .39 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000012788 | ortholog_many2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000031458 | ortholog_many2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000009222 | ortholog_many2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000006426 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000012512 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000016826 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000031188 | ortholog_one2many | 9 retrogenes | |
| Myotis lucifugus | ENSMLUG00000010330 | ortholog_one2many | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000009873 | ortholog_many2many | 6 retrogenes | |
| Otolemur garnettii | ENSOGAG00000003561 | ortholog_many2many | 18 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000002226 | ortholog_one2many | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000001170 | ortholog_one2many | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000008018 | ortholog_one2many | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000011541 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000000142 | ortholog_one2many | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000010359 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_102 | 88.99 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_205 | 96.30 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_912 | 52.04 | 86.11 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_1332 | 72.48 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cjac_2541 | 85.19 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_cjac_3173 | 57.27 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000001174 retrocopies