Parental gene:

ENSCJAG00000001989

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:3:190294240..190296129(+)


>ENSCJAG00000001989
ATGGCGCCGCCGGTGCAGGTCTCTCCGCTCATCAAGCTCGGCCGCTACTCCTTCTTGTTCCTCGGCATGGCCTACGGAGC
CACGCGCTACAGTTACCTAAAACCTCGGGCAGAAGAGGAGAGGAGGATAGCGGCAGAGGAGAAGAAGAAGCAGGATGAAC
TGAAACGGATTGCCAAGGAATTGGCAGAAGAGGACACCATACTTAAATGA

Library Parental gene expression (RPM)
SRP051959_spleen 3 .45 RPM
SRP051959_skeletal_muscle 12 .23 RPM
SRP051959_lymph_node 2 .72 RPM
SRP051959_lung 2 .86 RPM
SRP051959_liver 9 .51 RPM
SRP051959_kidney 7 .77 RPM
SRP051959_heart 10 .07 RPM
SRP051959_colon 6 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016722 ortholog_one2many 2 retrogenes
retro_amel_1171, retro_amel_1761,
Bos taurus ENSBTAG00000017496 ortholog_many2many 2 retrogenes
retro_btau_1222, retro_btau_219,
Canis familiaris ENSCAFG00000023527 ortholog_many2many 1 retrogene
retro_cfam_62,
Cavia porcellus ENSCPOG00000008678 ortholog_many2many 1 retrogene
retro_cpor_98,
Felis catus ENSFCAG00000029708 ortholog_one2many 1 retrogene
retro_fcat_268,
Mustela putorius furo ENSMPUG00000011414 ortholog_one2many 1 retrogene
retro_mputfur_494,
Mus musculus ENSMUSG00000050856 ortholog_one2many 1 retrogene
retro_mmus_3152,
Otolemur garnettii ENSOGAG00000012271 ortholog_one2many 1 retrogene
retro_ogar_1292,
Rattus norvegicus ENSRNOG00000000064 ortholog_one2many 1 retrogene
retro_rnor_697,
Tursiops truncatus ENSTTRG00000002962 ortholog_one2many 1 retrogene
retro_ttru_1938,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_352 94.37 100.00
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Download FASTA sequences of all ENSCJAG00000001989 retrocopies