Parental gene:

CMC1, ENSCJAG00000004272

Aliases:None
Description:COX assembly mitochondrial protein 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:28783]
Organism:Marmoset (Callithrix jacchus)
Coordinates:17:58894896..58974634(+)


>ENSCJAG00000004272
ATGGCGCTTGACCCCGCAGAGCAGCATCTCAGACATGTCGAAAAAGATGTTTTGATCCCTAAAAAAATGAGAGAAAAGGC
CAGAGAGAGGTGTTCCGAACAAATTCAAGATTTTACCAAATGTTGCCAGGACTCTGGAGTTCTTATGGTAATAAAATGCC
GGAAAGAAAACTCTGCATTGAAAGAATGTCTAACTGCTTACTATACTGATCCAGCCTTTTATGAAGAATGCAAAATGGAA
TACCTGAAGGAAAGGGAAGAATTCAGAAGAACTGGAATTCCTGCAAAGAAAAGGCTACAGAAGCTTCCCACAAGCATGTA
G

Library Parental gene expression (RPM)
SRP051959_spleen 5 .36 RPM
SRP051959_skeletal_muscle 3 .56 RPM
SRP051959_lymph_node 11 .46 RPM
SRP051959_lung 6 .08 RPM
SRP051959_liver 4 .87 RPM
SRP051959_kidney 4 .50 RPM
SRP051959_heart 5 .05 RPM
SRP051959_colon 3 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000018923 ortholog_one2one 2 retrogenes
retro_dnov_111, retro_dnov_651,
Homo sapiens ENSG00000187118 ortholog_one2one 4 retrogenes
retro_hsap_1372, retro_hsap_1764, retro_hsap_3229, retro_hsap_984,
Gorilla gorilla ENSGGOG00000012406 ortholog_one2one 4 retrogenes
retro_ggor_1067, retro_ggor_2196, retro_ggor_2245, retro_ggor_786,
Microcebus murinus ENSMICG00000011702 ortholog_one2one 2 retrogenes
retro_mmur_366, retro_mmur_759,
Myotis lucifugus ENSMLUG00000000044 ortholog_one2one 2 retrogenes
retro_mluc_1063, retro_mluc_759,
Nomascus leucogenys ENSNLEG00000004066 ortholog_one2one 4 retrogenes
retro_nleu_1075, retro_nleu_2763, retro_nleu_2830, retro_nleu_949,
Oryctolagus cuniculus ENSOCUG00000012793 ortholog_one2one 2 retrogenes
retro_ocun_1592, retro_ocun_1637,
Ochotona princeps ENSOPRG00000009474 ortholog_one2one 1 retrogene
retro_opri_463,
Pongo abelii ENSPPYG00000014054 ortholog_one2one 4 retrogenes
retro_pabe_1139, retro_pabe_1533, retro_pabe_2677, retro_pabe_833,
Pan troglodytes ENSPTRG00000014706 ortholog_one2one 4 retrogenes
retro_ptro_1207, retro_ptro_2181, retro_ptro_763, retro_ptro_942,
Rattus norvegicus ENSRNOG00000010149 ortholog_one2one 1 retrogene
retro_rnor_914,
Sorex araneus ENSSARG00000001629 ortholog_one2one 1 retrogene
retro_sara_186,
Tupaia belangeri ENSTBEG00000002573 ortholog_one2one 4 retrogenes
retro_tbel_3026, retro_tbel_3858, retro_tbel_4018, retro_tbel_4214,
Tarsius syrichta ENSTSYG00000011371 ortholog_one2one 2 retrogenes
retro_tsyr_1764, retro_tsyr_178,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2600 67.47 77.36
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_cjac_2653 63.11 94.34
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000004272 retrocopies