Parental gene:

ENSCJAG00000005111

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:X:107608998..107637410(-)


>ENSCJAG00000005111
ATGCCGAAAGTAGTGTCTAGGTCAGTAGTCTGCTCTGACACTCGGGACCGAGAGGAATATGACGACGGCGAGAAGCCTCT
CCATGTGTACTACTGTTTGTGCGGCCAGATGGTCCTAGTGCTGGTTAGTTTACTAGAGCTAATCCAGCTGCCTATGAACA
AAAGAGATGGAAGTAGATACATCTTGCCTGCTTCTTGGCACATGNCTCTGTTTCAAAATAAAGAAAAAGACATCTTCCAT
TTTCTGTGCAGACCTGAAGGCATTGAACGACAGTACAGGAAGAAATGTGCAAAGTGTGGACTGCTGCTCTTCTACCAATC
CCAGCCAAAGAATGCTCCTGTTACCTTCATCGTGGATGGAGCAGTAGTCAAGTTTGGCCAGGGCTTTGGAAAAACGAACA
TATATACTCAGAAACAAGAGCCTCCTAAGAAGGTGATGATGACCAAACGGACCAAAGACATGGGCAAGTTCAGTTCTGTC
ACTGTGTCTACCATCGATGAAGAAGAAGAAGAGATTGAGGCTAGGGAAGTTGCTGATTCGTATGCACAGAATGCCAAAGT
GATTGAAAAACAGCTAGAGCGCAAAGGCATGAGCAAGAGGCGACTGCAGGAGCTGGCTGAACTGGAAGCCAAGAAAGCGA
AAATGAAGGGGACCTTGATTGACAACCAGTTCAAATAA

Library Parental gene expression (RPM)
SRP051959_spleen 7 .31 RPM
SRP051959_skeletal_muscle 5 .28 RPM
SRP051959_lymph_node 6 .96 RPM
SRP051959_lung 7 .43 RPM
SRP051959_liver 4 .48 RPM
SRP051959_kidney 5 .01 RPM
SRP051959_heart 5 .37 RPM
SRP051959_colon 6 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000018610 possible_ortholog 1 retrogene
retro_hsap_4044,
Gorilla gorilla ENSGGOG00000013324 possible_ortholog 1 retrogene
retro_ggor_2711,
Latimeria chalumnae ENSLACG00000012468 ortholog_many2many 1 retrogene
retro_lcha_59,
Myotis lucifugus ENSMLUG00000015751 possible_ortholog 1 retrogene
retro_mluc_72,
Macaca mulatta ENSMMUG00000022665 possible_ortholog 1 retrogene
retro_mmul_2333,
Mus musculus ENSMUSG00000006423 possible_ortholog 1 retrogene
retro_mmus_1715,
Nomascus leucogenys ENSNLEG00000014862 possible_ortholog 1 retrogene
retro_nleu_2057,
Otolemur garnettii ENSOGAG00000012474 possible_ortholog 1 retrogene
retro_ogar_145,
Pongo abelii ENSPPYG00000020670 possible_ortholog 1 retrogene
retro_pabe_177,
Sorex araneus ENSSARG00000003163 possible_ortholog 1 retrogene
retro_sara_5,
Sarcophilus harrisii ENSSHAG00000006319 ortholog_many2many 1 retrogene
retro_shar_16,
Ictidomys tridecemlineatus ENSSTOG00000011579 possible_ortholog 1 retrogene
retro_itri_103,
Tarsius syrichta ENSTSYG00000008043 possible_ortholog 1 retrogene
retro_tsyr_634,
Tursiops truncatus ENSTTRG00000013101 possible_ortholog 2 retrogenes
retro_ttru_231, retro_ttru_77,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_311 83.56 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000005111 retrocopies