Parental gene:

LDHAL6A, ENSCJAG00000007067

Aliases:None
Description:lactate dehydrogenase A-like 6A [Source:HGNC Symbol;Acc:28335]
Organism:Marmoset (Callithrix jacchus)
Coordinates:11:81986907..82054673(+)


>ENSCJAG00000007067
ATGAGCTGGGCTGCAAGTGTTCTGCGGAGCAGCCAGAGAGCGGGCGCTGCGGGAGCGGATTGTTTTTGCACAAGGATGGC
TCCGTGTCTCCGCCAGGCGGTATGTGACCTGCTCGGGTCCGCTTCATGGAGGCTGAGCTGCCTGGTTTCCAGGATGGCAA
CTGTCAAGGGTGAACTTATTAAGAATGTCGCTGAGGAGAAGGCCATTCATCACAATAAGATCTCCATTGTAGGAAGTGGA
TCGGTTGGTGTGGCTTGTGCTATCAGCATCTTATTAAAAGGTTTGAGTGATGAGCTCGTCCTTGTGGATGATGATGAAGG
CAAACTGAAGGGTGAGACAATGGATCTTCAACACGGCGGCCCCTTTGTAAAAATGCCGAAAATTGTCTCCAGCAAAGATT
ACCTGGTCACTGCAAACTCCAATCTAGTAATTATCACGGCAGGTGCACGCCAGAAAAAAGGAGAAACACGCCTTGATTTA
GTCCAGCGAAATGTGTCCATCTTTAAATTAATAATTCCCAGTATTACCCAGTACAGTCCTCACTGCAAACTGCTTATTGT
TACTAATCCAGTGGATATTTTAACTTACGTGGCCTGGAAATTGAGTGCATTTCCCAAAAACCGTGTTATTGGAAGTGGCT
GTAATCTGGACTCCGCTCGTTTTCGTTACTTTATTGGGCAAAGGCTTGGCATCCACTCTGAAAGCTGTCATGGGCTGGTC
CTTGGAGAGCATGGTAACTCAAGTGTCCCTGTGTGGAGTGGTGTGAACATTGCTGGTGTCCCTCTGAAGGATCTGAACCC
AGATATAGGAACTTATAAAGATCCTGAGCAGTGGGAAAATGTCCATAAAAAAGTGGTTTCCAGCTACAGTGGCTATGAGA
TGCTCAAAATGAAAGGTTATACTTCTTGGGGCATTAGCCTATCTGTAGCTGATTTAACAGAAAGTATCTTGAAGAATCTT
AGGAGAGTGCATCCAGTTTCTACCCTAAGTAAGGGCCTCTATGGAATAAATGAAGAAATATTCCTTAGTGTCCCATGTAT
CCTGGGAGAGAATGGTATCGCAGACCTTATAAAAGTAAAACTGACCCTTGAAGAGGAGGCCTGCTTGCAAAAGAGTGCAG
AAATACTTTGGGAAATTCAGAAGGAGCTCAAGCTTTAA

Library Parental gene expression (RPM)
SRP051959_colon 0 .95 RPM
SRP051959_heart 0 .70 RPM
SRP051959_kidney 0 .58 RPM
SRP051959_liver 0 .95 RPM
SRP051959_lung 1 .29 RPM
SRP051959_lymph_node 1 .07 RPM
SRP051959_skeletal_muscle 0 .57 RPM
SRP051959_spleen 1 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007094 within_species_paralog 1 retrogene
retro_cjac_2290,
Homo sapiens ENSG00000166800 ortholog_one2one 2 retrogenes
retro_hsap_42, retro_hsap_905,
Macaca mulatta ENSMMUG00000014614 ortholog_one2one 2 retrogenes
retro_mmul_1111, retro_mmul_261,
Nomascus leucogenys ENSNLEG00000017780 ortholog_one2one 2 retrogenes
retro_nleu_29, retro_nleu_378,
Otolemur garnettii ENSOGAG00000009261 ortholog_one2one 1 retrogene
retro_ogar_2662,
Pongo abelii ENSPPYG00000003435 ortholog_one2one 2 retrogenes
retro_pabe_203, retro_pabe_779,
Pan troglodytes ENSPTRG00000003423 ortholog_one2one 1 retrogene
retro_ptro_62,
Tarsius syrichta ENSTSYG00000008062 possible_ortholog 4 retrogenes
retro_tsyr_1811, retro_tsyr_2064, retro_tsyr_2071, retro_tsyr_731,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_164 78.61 100.00
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2. retro_cjac_2180 62.27 100.00
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Download FASTA sequences of all ENSCJAG00000007067 retrocopies