Parental gene:

LDHAL6A, ENSG00000166800

Aliases:LDHAL6A, LDH6A
Description:lactate dehydrogenase A-like 6A [Source:HGNC Symbol;Acc:28335]
Organism:Human (Homo sapiens)
Coordinates:11:18477370..18501147(+)


>ENSG00000166800
ATGGCAACTATCAAGAGTGAACTTATTAAGAATTTCGCGGAAGAGGAGGCCATTCATCACAATAAGATCTCCATTGTAGG
AACTGGATCGGTTGGTGTGGCTTGTGCTATCAGCATCTTATTAAAAGGTTTGAGTGATGAACTTGTCCTTGTGGATGTTG
ATGAAGGCAAACTGAAGGGTGAGACAATGGATCTTCAACATGGCAGCCCTTTTATGAAAATGCCAAATATTGTCTCCAGC
AAAGATTACCTGGTCACTGCAAACTCCAATCTAGTGATTATCACAGCAGGTGCACGCCAGAAAAAAGGAGAAACACGCCT
TGATTTAGTCCAGCGAAATGTATCCATCTTTAAATTAATGATTCCCAATATTACCCAGTACAGTCCTCACTGCAAACTGC
TTATTGTTACTAATCCAGTGGATATCTTAACTTATGTAGCCTGGAAGTTGAGTGGATTTCCCAAAAACCGTGTTATTGGA
AGTGGTTGTAATCTGGACTCTGCTCGTTTTCGTTACTTTATTGGGCAAAGGCTTGGCATCCACTCTGAAAGCTGTCATGG
GCTGATCCTTGGAGAGCATGGCGACTCAAGTGTTCCTGTGTGGAGTGGTGTGAACATTGCTGGCGTCCCTCTGAAGGATC
TGAACCCAGATATAGGAACTGATAAAGATCCTGAGCAGTGGGAAAATGTCCACAAAAAAGTGATTTCCAGTGGCTATGAG
ATGGTCAAAATGAAAGGTTATACTTCTTGGGGCATTAGCCTATCTGTAGCTGATTTAACAGAAAGTATTTTGAAGAATCT
TAGGAGAGTGCATCCAGTTTCTACCCTAAGTAAGGGCCTCTATGGAATAAATGAAGACATATTCCTTAGTGTCCCATGTA
TCCTGGGAGAGAATGGTATCACAGACCTCATAAAAGTAAAACTGACTCTTGAAGAGGAGGCCTGCTTGCAAAAGAGTGCA
GAAACACTTTGGGAAATTCAGAAGGAGCTCAAGCTTTAA

Library Parental gene expression (RPM)
bodymap2_adipose 0 .24 RPM
bodymap2_adrenal 0 .84 RPM
bodymap2_brain 0 .59 RPM
bodymap2_breast 0 .16 RPM
bodymap2_colon 0 .04 RPM
bodymap2_heart 0 .06 RPM
bodymap2_kidney 0 .97 RPM
bodymap2_liver 0 .00 RPM
bodymap2_lung 0 .00 RPM
bodymap2_lymph_node 0 .27 RPM
bodymap2_ovary 0 .71 RPM
bodymap2_prostate 0 .00 RPM
bodymap2_skeletal_muscle 0 .00 RPM
bodymap2_testis 7 .33 RPM
bodymap2_thyroid 0 .79 RPM
bodymap2_white_blood_cells 0 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007067 ortholog_one2one 2 retrogenes
retro_cjac_164, retro_cjac_2180,
Homo sapiens ENSG00000111716 within_species_paralog 1 retrogene
retro_hsap_4863,
Homo sapiens ENSG00000134333 within_species_paralog 5 retrogenes
retro_hsap_2097, retro_hsap_2285, retro_hsap_3021, retro_hsap_323, retro_hsap_4231,
Macaca mulatta ENSMMUG00000014614 ortholog_one2one 2 retrogenes
retro_mmul_1111, retro_mmul_261,
Nomascus leucogenys ENSNLEG00000017780 ortholog_one2one 2 retrogenes
retro_nleu_29, retro_nleu_378,
Otolemur garnettii ENSOGAG00000009261 ortholog_one2one 1 retrogene
retro_ogar_2662,
Pongo abelii ENSPPYG00000003435 ortholog_one2one 2 retrogenes
retro_pabe_203, retro_pabe_779,
Pan troglodytes ENSPTRG00000003423 ortholog_one2one 1 retrogene
retro_ptro_62,
Tarsius syrichta ENSTSYG00000008062 possible_ortholog 4 retrogenes
retro_tsyr_1811, retro_tsyr_2064, retro_tsyr_2071, retro_tsyr_731,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_42 82.23 100.00
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2. retro_hsap_905 65.00 100.00
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Download FASTA sequences of all ENSG00000166800 retrocopies